Mercurial > repos > tduigou > selenzy

comparison test-data/uniprod_ids_out.xml @ 1:34a9d136a5bf draft

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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
author tduigou
date Tue, 08 Feb 2022 11:12:28 +0000
parents 481f7c35323d
children
comparison
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0:481f7c35323d 1:34a9d136a5bf
21 </rdf:RDF> 21 </rdf:RDF>
22 </annotation> 22 </annotation>
23 </compartment> 23 </compartment>
24 </listOfCompartments> 24 </listOfCompartments>
25 <listOfSpecies> 25 <listOfSpecies>
26 <species metaid="b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46" id="CMPD_0000000001" name="CMPD_0000000001" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> 26 <species metaid="_61841f05183ff06dbe77a0e01f6d73d7a890997d823ac18d9fd56bac3d4bcc39" id="MNXM24" name="MNXM24" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false">
27 <annotation> 27 <annotation>
28 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> 28 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
29 <rdf:Description rdf:about="#b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46"> 29 <rdf:Description rdf:about="#_61841f05183ff06dbe77a0e01f6d73d7a890997d823ac18d9fd56bac3d4bcc39">
30 <bqbiol:is> 30 <bqbiol:is>
31 <rdf:Bag/> 31 <rdf:Bag/>
32 </bqbiol:is> 32 </bqbiol:is>
33 </rdf:Description> 33 </rdf:Description>
34 <rdf:BRSynth rdf:about="#b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46"> 34 <rdf:BRSynth rdf:about="#_61841f05183ff06dbe77a0e01f6d73d7a890997d823ac18d9fd56bac3d4bcc39">
35 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu">
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37 <brsynth:inchi value="InChI=1S/C40H64/c1-33(2)19-13-23-37(7)27-17-31-39(9)29-15-25-35(5)21-11-12-22-36(6)26-16-30-40(10)32-18-28-38(8)24-14-20-34(3)4/h11-12,19-22,27-30H,13-18,23-26,31-32H2,1-10H3"/>
38 <brsynth:inchikey value="YVLPJIGOMTXXLP-UHFFFAOYSA-N"/>
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55 <brsynth:inchi value="InChI=1S/C5H12O7P2/c1-5(2)3-4-11-14(9,10)12-13(6,7)8/h1,3-4H2,2H3,(H,9,10)(H2,6,7,8)"/>
56 <brsynth:inchikey value="NUHSROFQTUXZQQ-UHFFFAOYSA-N"/>
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62 <species metaid="_53be86b11fa13c25dcb440bba6ef77b51b257a3674e6b2a0b88d272dc0a014cb" id="MNXM35" name="MNXM35" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false">
63 <annotation>
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73 <brsynth:inchi/> 37 <brsynth:inchi/>
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91 <brsynth:inchi value="InChI=1S/C15H28O7P2/c1-13(2)7-5-8-14(3)9-6-10-15(4)11-12-21-24(19,20)22-23(16,17)18/h7,9,11H,5-6,8,10,12H2,1-4H3,(H,19,20)(H2,16,17,18)"/> 55 <brsynth:inchi value="InChI=1S/C15H28O7P2/c1-13(2)7-5-8-14(3)9-6-10-15(4)11-12-21-24(19,20)22-23(16,17)18/h7,9,11H,5-6,8,10,12H2,1-4H3,(H,19,20)(H2,16,17,18)"/>
92 <brsynth:inchikey value="VWFJDQUYCIWHTN-UHFFFAOYSA-N"/> 56 <brsynth:inchikey value="VWFJDQUYCIWHTN-UHFFFAOYSA-N"/>
57 </brsynth:brsynth>
58 </rdf:BRSynth>
59 </rdf:RDF>
60 </annotation>
61 </species>
62 <species metaid="_53be86b11fa13c25dcb440bba6ef77b51b257a3674e6b2a0b88d272dc0a014cb" id="MNXM35" name="MNXM35" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false">
63 <annotation>
64 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
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73 <brsynth:inchi/>
74 <brsynth:inchikey/>
93 </brsynth:brsynth> 75 </brsynth:brsynth>
94 </rdf:BRSynth> 76 </rdf:BRSynth>
95 </rdf:RDF> 77 </rdf:RDF>
96 </annotation> 78 </annotation>
97 </species> 79 </species>
147 </brsynth:brsynth> 129 </brsynth:brsynth>
148 </rdf:BRSynth> 130 </rdf:BRSynth>
149 </rdf:RDF> 131 </rdf:RDF>
150 </annotation> 132 </annotation>
151 </species> 133 </species>
152 <species metaid="_61841f05183ff06dbe77a0e01f6d73d7a890997d823ac18d9fd56bac3d4bcc39" id="MNXM24" name="MNXM24" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> 134 <species metaid="b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46" id="CMPD_0000000001" name="CMPD_0000000001" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false">
153 <annotation> 135 <annotation>
154 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> 136 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
155 <rdf:Description rdf:about="#_61841f05183ff06dbe77a0e01f6d73d7a890997d823ac18d9fd56bac3d4bcc39"> 137 <rdf:Description rdf:about="#b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46">
156 <bqbiol:is> 138 <bqbiol:is>
157 <rdf:Bag/> 139 <rdf:Bag/>
158 </bqbiol:is> 140 </bqbiol:is>
159 </rdf:Description> 141 </rdf:Description>
160 <rdf:BRSynth rdf:about="#_61841f05183ff06dbe77a0e01f6d73d7a890997d823ac18d9fd56bac3d4bcc39"> 142 <rdf:BRSynth rdf:about="#b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46">
161 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> 143 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu">
162 <brsynth:smiles/> 144 <brsynth:smiles value="[H]C(=C([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H]"/>
163 <brsynth:inchi/> 145 <brsynth:inchi value="InChI=1S/C40H64/c1-33(2)19-13-23-37(7)27-17-31-39(9)29-15-25-35(5)21-11-12-22-36(6)26-16-30-40(10)32-18-28-38(8)24-14-20-34(3)4/h11-12,19-22,27-30H,13-18,23-26,31-32H2,1-10H3"/>
164 <brsynth:inchikey/> 146 <brsynth:inchikey value="YVLPJIGOMTXXLP-UHFFFAOYSA-N"/>
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148 </rdf:BRSynth>
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152 <species metaid="_47d72a86d31940edf1cc42c7a7361a7a96211dc2a6679326b8ad27a7e216ada0" id="MNXM83" name="MNXM83" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false">
153 <annotation>
154 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
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160 <rdf:BRSynth rdf:about="#_47d72a86d31940edf1cc42c7a7361a7a96211dc2a6679326b8ad27a7e216ada0">
161 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu">
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163 <brsynth:inchi value="InChI=1S/C5H12O7P2/c1-5(2)3-4-11-14(9,10)12-13(6,7)8/h1,3-4H2,2H3,(H,9,10)(H2,6,7,8)"/>
164 <brsynth:inchikey value="NUHSROFQTUXZQQ-UHFFFAOYSA-N"/>
165 </brsynth:brsynth> 165 </brsynth:brsynth>
166 </rdf:BRSynth> 166 </rdf:BRSynth>
167 </rdf:RDF> 167 </rdf:RDF>
168 </annotation> 168 </annotation>
169 </species> 169 </species>
7886 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> 7886 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/>
7887 </rdf:BRSynth> 7887 </rdf:BRSynth>
7888 </rdf:RDF> 7888 </rdf:RDF>
7889 </annotation> 7889 </annotation>
7890 <groups:listOfMembers> 7890 <groups:listOfMembers>
7891 <groups:member groups:idRef="CMPD_0000000003"/>
7891 <groups:member groups:idRef="CMPD_0000000001"/> 7892 <groups:member groups:idRef="CMPD_0000000001"/>
7892 <groups:member groups:idRef="CMPD_0000000003"/>
7893 </groups:listOfMembers> 7893 </groups:listOfMembers>
7894 </groups:group> 7894 </groups:group>
7895 <groups:group metaid="_564fce39b23c6cf87d12dc2c612448384fd2cd980fe3fc07829e2ef802645579" groups:id="rp_trunk_species" groups:kind="collection"> 7895 <groups:group metaid="_564fce39b23c6cf87d12dc2c612448384fd2cd980fe3fc07829e2ef802645579" groups:id="rp_trunk_species" groups:kind="collection">
7896 <annotation> 7896 <annotation>
7897 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> 7897 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
7899 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> 7899 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/>
7900 </rdf:BRSynth> 7900 </rdf:BRSynth>
7901 </rdf:RDF> 7901 </rdf:RDF>
7902 </annotation> 7902 </annotation>
7903 <groups:listOfMembers> 7903 <groups:listOfMembers>
7904 <groups:member groups:idRef="CMPD_0000000001"/>
7905 <groups:member groups:idRef="MNXM83"/>
7906 <groups:member groups:idRef="MNXM34"/> 7904 <groups:member groups:idRef="MNXM34"/>
7907 <groups:member groups:idRef="CMPD_0000000003"/> 7905 <groups:member groups:idRef="CMPD_0000000003"/>
7908 <groups:member groups:idRef="TARGET_0000000001"/> 7906 <groups:member groups:idRef="TARGET_0000000001"/>
7907 <groups:member groups:idRef="CMPD_0000000001"/>
7908 <groups:member groups:idRef="MNXM83"/>
7909 </groups:listOfMembers> 7909 </groups:listOfMembers>
7910 </groups:group> 7910 </groups:group>
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7912 <annotation> 7912 <annotation>
7913 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> 7913 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/">
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7917 </rdf:RDF> 7917 </rdf:RDF>
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7919 <groups:listOfMembers> 7919 <groups:listOfMembers>
7920 <groups:member groups:idRef="MNXM24"/>
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7920 <groups:member groups:idRef="MNXM35"/> 7922 <groups:member groups:idRef="MNXM35"/>
7921 <groups:member groups:idRef="MNXM11"/>
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7923 </groups:listOfMembers> 7923 </groups:listOfMembers>
7924 </groups:group> 7924 </groups:group>
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7933 <groups:listOfMembers> 7933 <groups:listOfMembers>
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7947 <groups:listOfMembers> 7947 <groups:listOfMembers>
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7959 </annotation> 7959 </annotation>
7960 <groups:listOfMembers> 7960 <groups:listOfMembers>
7961 <groups:member groups:idRef="MNXM35"/>
7962 <groups:member groups:idRef="MNXM24"/> 7961 <groups:member groups:idRef="MNXM24"/>
7963 <groups:member groups:idRef="TARGET_0000000001"/> 7962 <groups:member groups:idRef="TARGET_0000000001"/>
7963 <groups:member groups:idRef="MNXM35"/>
7964 </groups:listOfMembers> 7964 </groups:listOfMembers>
7965 </groups:group> 7965 </groups:group>
7966 </groups:listOfGroups> 7966 </groups:listOfGroups>
7967 </model> 7967 </model>
7968 </sbml> 7968 </sbml>