# HG changeset patch
# User tduigou
# Date 1767700150 0
# Node ID 830c96cbdd0de79f48746f991a05bb7b8efa7570
# Parent  9a741be08e6fd396abb61fc5e001d686390a9681
planemo upload for repository https://github.com/brsynth/straindesign commit e8c8f102cab10531ed588be4ecb8a0d01e797f09

diff -r 9a741be08e6f -r 830c96cbdd0d analyzing-model.xml
--- a/analyzing-model.xml	Tue Jul 23 19:26:16 2024 +0000
+++ b/analyzing-model.xml	Tue Jan 06 11:49:10 2026 +0000
@@ -57,7 +57,8 @@
             <param name="model" ftype="sbml" value="iAF1260.xml.gz"/>
             <param name="biomass_rxn_id" value="BIOMASS_Ec_iAF1260_core_59p81M" />
             <param name="target_rxn_id" value="EX_tyrp_e" />
-            <param name="substrate_rxn_id" value="EX_glc__D_e" />
+            <param name="substrate_cond|substrate_param" value="yes" />
+            <param name="substrate_cond|substrate_rxn_id" value="EX_glc__D_e" />
             <output name="output_png" ftype="png">
                 <assert_contents>
                     <has_size value="30000" delta="10000"/>
@@ -70,7 +71,8 @@
             <param name="pathway" ftype="sbml" value="butanol.xml" />
             <param name="medium" ftype="tabular" value="butanol.tsv" />
             <param name="biomass_rxn_id" value="BIOMASS_Ec_iAF1260_core_59p81M" />
-            <param name="substrate_rxn_id" value="EX_glc__D_e" />
+            <param name="substrate_cond|substrate_param" value="yes" />
+            <param name="substrate_cond|substrate_rxn_id" value="EX_glc__D_e" />
             <param name="target_rxn_id" value="EX_1btol_e" />
             <output name="output_png" ftype="png">
                 <assert_contents>