Mercurial > repos > tduigou > straindesign_reduce_model

changeset 3:e982ad1fb351 draft default tip

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planemo upload for repository https://github.com/brsynth/straindesign commit e8c8f102cab10531ed588be4ecb8a0d01e797f09
author tduigou
date Tue, 06 Jan 2026 11:48:59 +0000
parents 3119eda6ff48
children
files reduce-model.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/reduce-model.xml	Tue Jul 23 19:26:11 2024 +0000
+++ b/reduce-model.xml	Tue Jan 06 11:48:59 2026 +0000
@@ -60,8 +60,8 @@
         <test>
             <!--  test 2  -->
             <param name="model" ftype="sbml" value="iAF1260.xml.gz"/>
-            <param name="sd_cond" value="yes"/>
-            <param name="sd_tsv" ftype="tabular" value="simulate_deletion.butanol.iAF1260.tsv"/>
+            <param name="sd_strategy|sd_cond" value="yes"/>
+            <param name="sd_strategy|sd_tsv" ftype="tabular" value="simulate_deletion.butanol.iAF1260.tsv"/>
             <output name="output_sbml" ftype="sbml">
                 <assert_contents>
                     <is_valid_xml/>
@@ -73,8 +73,8 @@
         <test>
             <!--  test 3  -->
             <param name="model" ftype="sbml" value="iAF1260.xml.gz"/>
-            <param name="sd_cond" value="yes"/>
-            <param name="sd_tsv" ftype="tabular" value="simulate_deletion.butanol.iAF1260.tsv"/>
+            <param name="sd_strategy|sd_cond" value="yes"/>
+            <param name="sd_strategy|sd_tsv" ftype="tabular" value="simulate_deletion.butanol.iAF1260.tsv"/>
             <param name="input_gene_str" value="b4208 b4208 b3919"/>
             <output name="output_sbml" ftype="sbml">
                 <assert_contents>