Mercurial > repos > testtool > 450kdependency

diff tool_dependencies.xml @ 45:0df92721ada0 draft

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author testtool
date Fri, 05 May 2017 07:11:00 -0400
parents d931781755e7
children 4f4ff04de297
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line diff
--- a/tool_dependencies.xml	Fri May 05 07:00:04 2017 -0400
+++ b/tool_dependencies.xml	Fri May 05 07:11:00 2017 -0400
@@ -18,7 +18,9 @@
                     </repository>
                     <package>http://bioconductor.org/packages/release/bioc/src/contrib/BiocGenerics_0.22.0.tar.gz</package>
                     <package>http://bioconductor.org/packages/3.2/bioc/src/contrib/S4Vectors_0.8.11.tar.gz</package>
-                    <package>http://bioconductor.org/packages/release/bioc/src/contrib/IRanges_2.10.0.tar.gz</package>
+                    <package>http://bioconductor.org/packages/3.2/bioc/src/contrib/IRanges_2.4.8.tar.gz</package>
+                    <package>http://bioconductor.org/packages/3.2/bioc/src/contrib/GenomicRanges_1.22.4.tar.gz</package>
+                    <package>http://bioconductor.org/packages/3.2/bioc/src/contrib/XVector_0.10.0.tar.gz</package>
                     <package>http://bioconductor.org/packages/release/bioc/src/contrib/GenomeInfoDb_1.12.0.tar.gz</package>
                     <package>http://bioconductor.org/packages/release/bioc/src/contrib/zlibbioc_1.22.0.tar.gz</package>
                     <package>https://cran.rstudio.com/src/contrib/locfit_1.5-9.1.tar.gz</package>
@@ -28,7 +30,6 @@
                     <package>https://bioc.ism.ac.jp/packages/3.3/bioc/src/contrib/SummarizedExperiment_1.2.3.tar.gz</package>
                     <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/Biobase_2.36.1.tar.gz</package>
                     <package>http://bioconductor.org/packages/release/bioc/src/contrib/Biostrings_2.44.0.tar.gz</package>
-                    <package>https://bioconductor.riken.jp/packages/3.3/bioc/src/contrib/GenomicRanges_1.24.3.tar.gz</package>
                     <package>https://cran.rstudio.com/src/contrib/locfit_1.5-9.1.tar.gz</package>
                     <package>http://bioconductor.org/packages/release/bioc/src/contrib/genefilter_1.58.0.tar.gz</package>
                     <package>http://bioconductor.org/packages/release/bioc/src/contrib/GenomicFeatures_1.28.0.tar.gz</package>
@@ -80,7 +81,6 @@
                     <package>http://bioconductor.org/packages/release/bioc/src/contrib/rtracklayer_1.36.0.tar.gz</package>
                     <package>http://bioc.ism.ac.jp/packages/3.3/bioc/src/contrib/minfi_1.18.6.tar.gz</package>
                     <package>https://mirrors.ustc.edu.cn/bioc/packages/3.3/bioc/src/contrib/bumphunter_1.12.0.tar.gz</package>
-                    <package>https://mirrors.ustc.edu.cn/bioc/packages/3.2/bioc/src/contrib/XVector_0.10.0.tar.gz</package>
                   </action>
               </actions>
               </install>