--- a/tool_dependencies.xml	Fri May 05 08:55:11 2017 -0400
+++ b/tool_dependencies.xml	Fri May 05 10:13:23 2017 -0400
@@ -26,6 +26,7 @@
                     <package>https://cran.r-project.org/src/contrib/registry_0.3.tar.gz</package>
                     <package>https://cran.r-project.org/src/contrib/digest_0.6.12.tar.gz</package>
                     <package>https://cran.r-project.org/src/contrib/stringi_1.1.5.tar.gz</package>
+                    <package>https://cran.r-project.org/src/contrib/magrittr_1.5.tar.gz</package>
                     <package>https://cran.r-project.org/src/contrib/stringr_1.2.0.tar.gz</package>
                     <package>https://cran.r-project.org/src/contrib/xtable_1.8-2.tar.gz</package>
                     <package>https://cran.r-project.org/src/contrib/pkgmaker_0.22.tar.gz</package>
@@ -45,7 +46,6 @@
                     <package>http://bioconductor.org/packages/release/bioc/src/contrib/biomaRt_2.32.0.tar.gz</package>
                     <package>https://cran.r-project.org/src/contrib/Rcpp_0.12.10.tar.gz</package>
                     <package>https://cran.r-project.org/src/contrib/base64_2.0.tar.gz</package>
-                    <package>https://cran.r-project.org/src/contrib/stringi_1.1.5.tar.gz</package>
                     <package>https://cran.r-project.org/src/contrib/quadprog_1.5-5.tar.gz</package>
                     <package>http://bioconductor.org/packages/release/bioc/src/contrib/siggenes_1.50.0.tar.gz</package>
                     <package>https://cran.r-project.org/src/contrib/Matrix_1.2-10.tar.gz</package>
@@ -78,7 +78,6 @@
                     <package>http://bioconductor.org/packages/3.2/bioc/src/contrib/XVector_0.10.0.tar.gz</package>
                     <package>http://bioconductor.org/packages/release/bioc/src/contrib/Biostrings_2.44.0.tar.gz</package>
                     <package>http://bioconductor.org/packages/3.2/bioc/src/contrib/GenomicRanges_1.22.4.tar.gz</package>
-                    <package>http://bioconductor.org/packages/release/bioc/src/contrib/Biostrings_2.44.0.tar.gz</package>
                     <package>http://bioconductor.org/packages/release/bioc/src/contrib/rtracklayer_1.36.0.tar.gz</package>
                     <package>http://bioc.ism.ac.jp/packages/3.3/bioc/src/contrib/minfi_1.18.6.tar.gz</package>
                     <package>https://mirrors.ustc.edu.cn/bioc/packages/3.3/bioc/src/contrib/bumphunter_1.12.0.tar.gz</package>