Mercurial > repos > testtool > annotate_peak

changeset 20:2044ad2c1c93 draft default tip

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Uploaded
author testtool
date Mon, 20 Mar 2017 07:39:23 -0400
parents 741b192da59c
children
files annotate_peak/annotatePeak.R annotate_peak/annotatePeak.xml
diffstat 2 files changed, 1 insertions(+), 2 deletions(-) [+]
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line diff
--- a/annotate_peak/annotatePeak.R	Mon Mar 20 07:19:42 2017 -0400
+++ b/annotate_peak/annotatePeak.R	Mon Mar 20 07:39:23 2017 -0400
@@ -1,4 +1,3 @@
-require("ChIPseeker", quietly = TRUE)
 require("ChIPpeakAnno", quietly = TRUE)
 require("EnsDb.Hsapiens.v75", quietly = TRUE)
 require("EnsDb.Mmusculus.v75", quietly = TRUE)
--- a/annotate_peak/annotatePeak.xml	Mon Mar 20 07:19:42 2017 -0400
+++ b/annotate_peak/annotatePeak.xml	Mon Mar 20 07:39:23 2017 -0400
@@ -12,7 +12,7 @@
     </param>
     <param name="annoData" type="select" label="annoData" help="choose your annoData human or mice">
       <option name="human" type="text" value="EnsDb.Hsapiens.v75">Human</option>
-      <option name="mice" type="float" value="">Mice</option>
+      <option name="mice" type="text" value="EnsDb.Mmusculus.v75">Mice</option>
     </param>
     <param name="bindingType" type="select" label="bindingType" help="choose bindingType">
       <option name="sS" type="text" value="startSite">startSite</option>