Mercurial > repos > testtool > find_snp

changeset 3:3e5470e49ba5 draft

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Uploaded
author testtool
date Sun, 11 Jun 2017 16:31:46 -0400
parents 15bb9a34d924
children c70d0aba0e82
files findSNPs/findSNPs.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/findSNPs/findSNPs.xml	Sun Jun 11 11:49:04 2017 -0400
+++ b/findSNPs/findSNPs.xml	Sun Jun 11 16:31:46 2017 -0400
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="UTF-8"?>
-<tool id="findSNPs" name="findSNPs" version="1.16.2">
+<tool id="findSNPs" name="findSNPs" version="1.20.0">
 <requirements>
 <requirement type="package" version="1.20.0">bioconductor-minfi</requirement>
 </requirements>
@@ -8,7 +8,7 @@
 </stdio>
   <command> Rscript $__tool_directory__/findSNPs.R "$input" "$output" </command>
   <inputs>
-     <param name="input" type="RDdata" value="" label="Genomic Ratio Set" help="e.g. 'GRsetFromGEO tool output'"/>
+     <param format="RDdata" name="input" label="Genomic Ratio Set" help="e.g. 'GRsetFromGEO tool output'"/>
   </inputs>
   <outputs>
     <data format="text" name="output" label="findSNPs.txt"/>
@@ -18,11 +18,11 @@
       <param name="test">
       <element name="test-data">
           <collection type="data">
-                <element name="input" format="RData"  name="output" label="test-data/out.RData"> </element>
+                <element name="input" format="RData" label="test-data/out.RData"> </element>
           </collection>
         </element>
         </param>
-        <output type="data" format="text"  name="output" label="test-data/findSNPs.txt"/>
+        <output name="output" type="data" format="text" label="test-data/findSNPs.txt"/>
         </test>
     </tests>
   <help>