Mercurial > repos > testtool > geo_data

comparison GRsetFromGEO/GRsetFromGEO.R @ 20:882e9c8498fa draft

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author testtool
date Wed, 12 Apr 2017 13:00:22 -0400
parents 79cf43dbbf79
children 59122070e61d
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19:79cf43dbbf79 20:882e9c8498fa
3 3
4 args <- commandArgs(trailingOnly = TRUE) 4 args <- commandArgs(trailingOnly = TRUE)
5 GSE = args[1] 5 GSE = args[1]
6 output = args[2] 6 output = args[2]
7 7
8 GRset <- getGenomicRatioSetFromGEO(GSE) 8 GRset <- minfi::getGenomicRatioSetFromGEO(GSE)
9 9
10 save(GRset,file = output) 10 save(GRset,file = output)