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comparison GRsetFromGEO/GRsetFromGEO.R @ 55:f84cadc1fdd6 draft

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author testtool
date Tue, 25 Apr 2017 11:03:34 -0400
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54:7aab6e28c62e 55:f84cadc1fdd6
1 require("minfi", quietly = TRUE)
2
3 options(warn = -1)
4 options("download.file.method"="wget")
5
6 args <- commandArgs(trailingOnly = TRUE)
7 GSE = args[1]
8 output = args[2]
9
10 GRset <- getGenomicRatioSetFromGEO(GSE)
11
12 save(GRset,file = output)