# HG changeset patch
# User testtool
# Date 1493041539 14400
# Node ID 234e990e8e1d34cd5d25cb850e61dd31582ead4a
# Parent  925945cca45fdbe86efeb7edbc889c935842329a
Uploaded

diff -r 925945cca45f -r 234e990e8e1d GRsetFromGEO/GRsetFromGEO.R
--- a/GRsetFromGEO/GRsetFromGEO.R	Mon Apr 24 09:29:38 2017 -0400
+++ b/GRsetFromGEO/GRsetFromGEO.R	Mon Apr 24 09:45:39 2017 -0400
@@ -1,8 +1,5 @@
 require("minfi", quietly = TRUE)
-require("BiocGenerics", quietly = TRUE)
-require("data.table", quietly = TRUE)
 require("GEOquery", quietly = TRUE)
-require("rtracklayer", quietly = TRUE)
 require("FDb.InfiniumMethylation.hg19", quietly = TRUE)
 
 args <- commandArgs(trailingOnly = TRUE)
diff -r 925945cca45f -r 234e990e8e1d GRsetFromGEO/tool_dependencies.xml
--- a/GRsetFromGEO/tool_dependencies.xml	Mon Apr 24 09:29:38 2017 -0400
+++ b/GRsetFromGEO/tool_dependencies.xml	Mon Apr 24 09:45:39 2017 -0400
@@ -269,6 +269,9 @@
                         <package>
                           https://bioarchive.galaxyproject.org/minfi_1.20.0.tar.gz
                       </package>
+                      <package>
+                        https://bioarchive.galaxyproject.org/GEOquery_2.20.0.tar.gz
+                    </package>
                   </action>
               </actions>
-            </tool_dependency>
\ No newline at end of file
+            </tool_dependency>