Mercurial > repos > testtool > get_geo
comparison getGEO/getGEO.xml @ 20:32aee52e7f61 draft
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author | testtool |
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date | Mon, 06 Feb 2017 06:28:57 -0500 |
parents | f1a3a417a145 |
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19:f49d9ccacc73 | 20:32aee52e7f61 |
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1 <tool id="GEO" name="getGEO" version="1.16.2"> | 1 <tool id="GEO" name="getGEO" version="1.16.2"> |
2 <?xml version='1.0' encoding='utf-8'?> | 2 <?xml version='1.0' encoding='utf-8'?> |
3 <requirements> | 3 <requirements> |
4 <tool_dependency> | 4 <tool_dependency> |
5 <package name="methyldata_1_16_2" version="1.16.2"> | 5 <package name="R" version="3.2.1"> |
6 <repository name="methyldata_1_16_2" owner="testtool" prior_installation_required="True" /> | 6 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> |
7 </package> | 7 </package> |
8 </tool_dependency> | 8 </tool_dependency> |
9 </requirements> | 9 </requirements> |
10 <stdio> | 10 <stdio> |
11 <exit_code range="1:" /> | 11 <exit_code range="1:" /> |
12 </stdio> | 12 </stdio> |
13 <command> Rscript $__tool_directory__/getGEO.R "$GSMTable" "$MetaTable" "$IlmnTable" "$gmTable"</command> | 13 <command> Rscript $__tool_directory__/getGEO.R "$GSMTable" "$MetaTable" "$IlmnTable" "$gmTable"</command> |