comparison getGEO/getGEO.xml @ 20:32aee52e7f61 draft

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author testtool
date Mon, 06 Feb 2017 06:28:57 -0500
parents f1a3a417a145
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19:f49d9ccacc73 20:32aee52e7f61
1 <tool id="GEO" name="getGEO" version="1.16.2"> 1 <tool id="GEO" name="getGEO" version="1.16.2">
2 <?xml version='1.0' encoding='utf-8'?> 2 <?xml version='1.0' encoding='utf-8'?>
3 <requirements> 3 <requirements>
4 <tool_dependency> 4 <tool_dependency>
5 <package name="methyldata_1_16_2" version="1.16.2"> 5 <package name="R" version="3.2.1">
6 <repository name="methyldata_1_16_2" owner="testtool" prior_installation_required="True" /> 6 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
7 </package> 7 </package>
8 </tool_dependency> 8 </tool_dependency>
9 </requirements> 9 </requirements>
10 <stdio> 10 <stdio>
11 <exit_code range="1:" /> 11 <exit_code range="1:" />
12 </stdio> 12 </stdio>
13 <command> Rscript $__tool_directory__/getGEO.R "$GSMTable" "$MetaTable" "$IlmnTable" "$gmTable"</command> 13 <command> Rscript $__tool_directory__/getGEO.R "$GSMTable" "$MetaTable" "$IlmnTable" "$gmTable"</command>