Mercurial > repos > testtool > get_geo

comparison getGEO/getGEO.xml @ 15:c035531adb1b draft

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author testtool
date Thu, 19 Jan 2017 06:44:40 -0500
parents a0fefac1e0e1
children 73cd17bea9c4
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14:a0fefac1e0e1 15:c035531adb1b
2 <macros> 2 <macros>
3 <import>getGEO_macros.xml</import> 3 <import>getGEO_macros.xml</import>
4 </macros> 4 </macros>
5 <expand macro="requirements" /> 5 <expand macro="requirements" />
6 <stdio> 6 <stdio>
7 <exit_code range="1:" /> 7 <exit_code range="1:" />
8 </stdio> 8 </stdio>
9 <command> Rscript $__tool_directory__/getGEO.R "$GSMTable" "$MetaTable" "$IlmnTable" "$gmTable"</command> 9 <command> Rscript $__tool_directory__/getGEO.R "$GSMTable" "$MetaTable" "$IlmnTable" "$gmTable"</command>
10 <inputs> 10 <inputs>
11 <param optional="false" format="csv" name="GSMTable" type="data" value="" help="GEO table of data." label="[required] GSMTable"> 11 <param optional="false" format="csv" name="GSMTable" type="data" value="" help="GEO table of data." label="[required] GSMTable">
12 <validator type="empty_field" message="This field is required."/> 12 <validator type="empty_field" message="This field is required."/>