--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/getGEO/.Rhistory	Mon Feb 06 09:39:52 2017 -0500
@@ -0,0 +1,17 @@
+first<-getGEO(TAB$ID[1],getGPL=FALSE)
+require("BiocGenerics",quietly = TRUE)
+require("data.table",quietly = TRUE)
+require("minfi",quietly = TRUE)
+require("ChIPseeker",quietly = TRUE)
+require("ChIPpeakAnno",quietly = TRUE)
+require("TxDb.Hsapiens.UCSC.hg19.knownGene",quietly = TRUE)
+require("FDb.InfiniumMethylation.hg19",quietly = TRUE)
+require("GEOquery",quietly = TRUE)
+require("rtracklayer",quietly = TRUE)
+install.packages("formatR")
+library(formatR)
+getwd()
+tidy_eval("/Users/katarzynamurat/Desktop/galaxy/tools/getGEO")
+tidy_eval("/Users/katarzynamurat/Desktop/galaxy/tools/getGEO")
+source('~/Desktop/galaxy/tools/findDMR/findDMR.R')
+source('~/Desktop/galaxy/tools/findDMR/findDMR.R')