Mercurial > repos > testtool > get_gr_set

comparison GRsetFromGEO/GRsetFromGEO.R @ 5:7511130b5068 draft

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author testtool
date Sun, 11 Jun 2017 07:49:41 -0400
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4:86777f72f33c 5:7511130b5068
1 require("minfi", quietly = TRUE)
2
3 options(warn = -1)
4 options("download.file.method"="wget")
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6 args <- commandArgs(trailingOnly = TRUE)
7 GSE = args[1]
8 output = args[2]
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10 GRset <- getGenomicRatioSetFromGEO(GSE)
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12 save(GRset,file = output)