Mercurial > repos > testtool > get_gr_set

comparison GRsetFromGEO/GRsetFromGEO.xml @ 49:bd3036f7baf4 draft

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author testtool
date Thu, 10 Aug 2017 06:17:20 -0400
parents b68434e4db0e
children 119dad795f32
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48:20d50c006fca 49:bd3036f7baf4
1 <tool id="getGRset" name="GRsetFromGEO"> 1 <tool id="getGRset" name="GRsetFromGEO">
2 <description>downloads data from GEO</description> 2 <description>downloads data from GEO</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.20.0">bioconductor-minfi</requirement> 4 <requirement type="package" version="1.20.0">bioconductor-minfi</requirement>
5 <requirement type="package" version="0.6.0">bioconductor-illuminahumanmethylation450kanno.ilmn12.hg19</requirement>
6 </requirements> 5 </requirements>
7 <stdio> 6 <stdio>
8 <exit_code range="1:" /> 7 <exit_code range="1:" />
9 </stdio> 8 </stdio>
10 <command>Rscript $__tool_directory__/GRsetFromGEO.R "$input" "$output"</command> 9 <command>Rscript $__tool_directory__/GRsetFromGEO.R "$input" "$output"</command>