Mercurial > repos > testtool > get_gr_set

diff GRsetFromGEO/GRsetFromGEO.xml @ 47:b68434e4db0e draft

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Uploaded
author testtool
date Tue, 08 Aug 2017 11:52:38 -0400
parents ed948c608056
children bd3036f7baf4
line wrap: on
line diff
--- a/GRsetFromGEO/GRsetFromGEO.xml	Tue Aug 08 09:44:54 2017 -0400
+++ b/GRsetFromGEO/GRsetFromGEO.xml	Tue Aug 08 11:52:38 2017 -0400
@@ -7,7 +7,7 @@
   <stdio>
   <exit_code range="1:" />
   </stdio>
-  <command>Rscript $__tool_directory__/GRsetFromGEO.R $input output.rdata</command>
+  <command>Rscript $__tool_directory__/GRsetFromGEO.R "$input" "$output"</command>
   <inputs>
     <param format="text" name="input" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/>
   </inputs>