# HG changeset patch # User testtool # Date 1497356662 14400 # Node ID bfc8b961afe1bba14bfc38042e87043b70805197 # Parent 8fb59470e29422abc0d085ce1114a393ac222eca Uploaded diff -r 8fb59470e294 -r bfc8b961afe1 GRsetFromGEO/GRsetFromGEO.R --- a/GRsetFromGEO/GRsetFromGEO.R Tue Jun 13 07:30:46 2017 -0400 +++ b/GRsetFromGEO/GRsetFromGEO.R Tue Jun 13 08:24:22 2017 -0400 @@ -1,7 +1,7 @@ require("minfi", quietly = TRUE) options(warn = -1) -options('download.file.method.GEOquery' = 'wget') +options('download.file.method'='wget') args <- commandArgs(trailingOnly = TRUE) GSE = args[1] diff -r 8fb59470e294 -r bfc8b961afe1 GRsetFromGEO/GRsetFromGEO.xml --- a/GRsetFromGEO/GRsetFromGEO.xml Tue Jun 13 07:30:46 2017 -0400 +++ b/GRsetFromGEO/GRsetFromGEO.xml Tue Jun 13 08:24:22 2017 -0400 @@ -1,6 +1,7 @@ +gnu-wget bioconductor-minfi