# HG changeset patch
# User testtool
# Date 1515693538 18000
# Node ID ddd126dbb19a7b4d0c80a704b3dfd029c43754b7
# Parent  8673a0225e2b5786e92669fbc6b3756b521d8be7
Uploaded

diff -r 8673a0225e2b -r ddd126dbb19a GRsetFromGEO/.Rapp.history
diff -r 8673a0225e2b -r ddd126dbb19a GRsetFromGEO/.Rhistory
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/GRsetFromGEO/.Rhistory	Thu Jan 11 12:58:58 2018 -0500
@@ -0,0 +1,16 @@
+require("minfi", quietly = TRUE)
+?require
+require("minfi", quietly = TRUE)
+minfi
+as.data.frame(GRset)
+GRset <- getGenomicRatioSetFromGEO(GSE)
+getGenomicRatioSetFromGEO
+require("minfi", quietly = TRUE)
+options(warn = -1)
+options("download.file.method"="wget")
+args <- commandArgs(trailingOnly = TRUE)
+GSE = args[1]
+output = args[2]
+GRset <- getGenomicRatioSetFromGEO(GSE)
+save(GRset,file = output)
+sessionInfo()
diff -r 8673a0225e2b -r ddd126dbb19a GRsetFromGEO/._.DS_Store
Binary file GRsetFromGEO/._.DS_Store has changed
diff -r 8673a0225e2b -r ddd126dbb19a GRsetFromGEO/._GRsetFromGEO.xml
Binary file GRsetFromGEO/._GRsetFromGEO.xml has changed
diff -r 8673a0225e2b -r ddd126dbb19a GRsetFromGEO/._~$setFromGEO.xml
Binary file GRsetFromGEO/._~$setFromGEO.xml has changed
diff -r 8673a0225e2b -r ddd126dbb19a GRsetFromGEO/~$setFromGEO.xml
Binary file GRsetFromGEO/~$setFromGEO.xml has changed