Mercurial > repos > testtool > get_gr_set

changeset 51:55c57fa3f679 draft

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Deleted selected files
author testtool
date Thu, 10 Aug 2017 06:19:20 -0400
parents d793e03b4da1
children d6c7c3ed3290
files GRsetFromGEO.R
diffstat 1 files changed, 0 insertions(+), 16 deletions(-) [+]
line wrap: on
line diff
--- a/GRsetFromGEO.R	Thu Aug 10 06:19:14 2017 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,16 +0,0 @@
-require(minfi, quietly = TRUE)
-
-options(warn = -1)
-options('download.file.method.GEOquery' = 'wget')
-options('GEOquery.inmemory.gpl'=FALSE)
-
-
-args <- commandArgs(trailingOnly = TRUE)
-input = args[1] 
-output = args[2] 
-
-GRset <- getGenomicRatioSetFromGEO(input)
-
-save(GRset,file = output)
-
-