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comparison getGSMdata/getGSMdata.xml @ 20:a16c8aca54ed draft

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author testtool
date Mon, 06 Feb 2017 10:12:07 -0500
parents 28717b0d370e
children 4cb6d25a2234
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19:28717b0d370e 20:a16c8aca54ed
1 <tool id="GSM" name="getGSMdata" version="1.16.2"> 1 <tool id="GSM" name="getGSMdata" version="1.16.2">
2 <description>from GEO</description>
3 <requirements> 2 <requirements>
4 <requirement type="package" version="3.2.1">R</requirement> 3 <requirement type="package" version="3.2.1">R</requirement>
5 </requirements> 4 </requirements>
6 <stdio> 5 <stdio>
7 <exit_code range="1:" /> 6 <exit_code range="1:" />
8 </stdio> 7 </stdio>
8 <description>from GEO</description>
9 <command> Rscript $__tool_directory__/getGSMdata.R "$GSE" "$GSMTable" </command> 9 <command> Rscript $__tool_directory__/getGSMdata.R "$GSE" "$GSMTable" </command>
10 <inputs> 10 <inputs>
11 <param name="GSE" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/> 11 <param name="GSE" type="text" value="" label="Enter GSE ID." help="e.g. 'GSE51547'"/>
12 </inputs> 12 </inputs>
13 <outputs> 13 <outputs>