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annotate test-data/TEST_2/TEST_2.gff3 @ 5:7686d59927cd draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
author thanhlv
date Fri, 28 Apr 2023 18:25:36 +0000
parents 54ca20519f70
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54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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1 ##gff-version 3
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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2 ##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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3 # organism Escherichia coli o157:h7 Sakai
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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4 # Annotated with Bakta
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5 # Software: v1.5.0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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6 # Database: v4.0
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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7 # DOI: 10.1099/mgen.0.000685
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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8 # URL: github.com/oschwengers/bakta
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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9 ##sequence-region NC_002127.1 1 1330
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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10 NC_002127.1 Bakta region 1 1330 . + . ID=NC_002127.1;Name=NC_002127.1;Is_circular=true
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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11 NC_002127.1 Prodigal CDS 413 736 . + 0 ID=IHHALP_00005;Name=hypothetical protein;locus_tag=IHHALP_00005;product=hypothetical protein
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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12 NC_002127.1 Prodigal CDS 971 1471 . - 0 ID=IHHALP_00010;Name=hypothetical protein;locus_tag=IHHALP_00010;product=hypothetical protein
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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13 ##FASTA
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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14 >NC_002127.1
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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15 TTCTTCTGCGAGTTCGTGCAGCTTCTCACACATGGTGGCCTGCTCGTCAGCATCGAGTGC
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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16 GTCCAGTTTTTCGAGCAGCGTCAGGCTCTGGCTTTTTATGAATCCCGCCATGTTGAGTGC
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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17 AGTTTGCTGCTGCTTGTTCATCTTTCTGTTTTCTCCGTTCTGTCTGTCATCTGCGTCGTG
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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18 TGATTATATCGCGCACCACTTTTCGACCGTCTTACCGCCGGTATTCTGCCGACGGACATT
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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19 TCAGTCAGACAACACTGTCACTGCCAAAAAACAGCAGTGCTTTGTTGGTAATTCGAACTT
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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20 GCAGACAGGACAGGATGTGCAATTGTTATACCGCGCATACATGCACGCTATTACAATTAC
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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21 CCTGGTCAGGGCTTCGCCCCGACACCCCATGTCAGATACGGAGCCATGTTTTATGACAAA
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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22 ACGAAGTGGAAGTAATACGCGCAGGCGGGCTATCAGTCGCCCTGTTCGTCTGACGGCAGA
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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23 AGAAGACCAGGAAATCAGAAAAAGGGCTGCTGAATGCGGCAAGACCGTTTCTGGTTTTTT
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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24 ACGGGCGGCAGCTCTCGGTAAGAAAGTTAACTCACTGACTGATGACCGGGTGCTGAAAGA
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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25 AGTTATGCGACTGGGGGCGTTGCAGAAAAAACTCTTTATCGACGGCAAGCGTGTCGGGGA
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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26 CAGAGAGTATGCGGAGGTGCTGATCGCTATTACGGAGTATCACCGTGCCCTGTTATCCAG
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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27 GCTTATGGCAGATTAGCTTCCCGGAGAGAAACTGTCGAAAACAGACGGTATGAACGCCGT
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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28 AAGCCCCCAAACCGATCGCCATTCACTTTCATGCATAGCTATGCAGTGAGCTGAAAGCGA
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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29 TCCTGACGCATTTTTCCGGTTTACCCCGGGGAAAACATCTCTTTTTGCGGTGTCTGCGTC
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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30 AGAATCGCGTTCAGCGCGTTTTGGCGGTGCGCGTAATGAGACGTTATGGTAAATGTCTTC
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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31 TGGCTTGATATTATATTGGAATGCCTTTTTTCAAAGCAAATGATGTGGCTTTGGATAGAA
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32 GGTTTACGTTGATCTTATCAAAGTTTTTTTTAAAGAACGAAGCCGAGAGCTCAGATAAAT
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33 CATTATATTCATCAGTTTTCGTAACTTTGTTTAATGTGTAACTTGAAAACTTCTCGCCAT
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34 TAAATGACGTATAGACGTAACGATCTTTTTTTCCACCGTTAGGAATTATTAAATCAAAAA
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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35 AAACATCACCCTTGCTTTTCTTTTTCTTCAAGTCGGATTCGATTTTTGAGAAAAATTCGC
54ca20519f70 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 6b06711cfba45855d5a992ed1c73c472eaef644f-dirty
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36 TCGGGCTATAAATATCAGTAGCATAGACAATAAATAAAGTTTTATCTTTATTTTTTATTG
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37 CTTCTATTTG