Mercurial > repos > thanhlv > centrifuge
comparison tool-data/centrifuge_indices.loc.sample @ 0:a33c3356b8cf draft default tip
"planemo upload for repository https://github.com/quadram-institute-bioscience/galaxy-tools/tree/master/tools/centrifuge commit e7a2d92dc14da78e7ba641c603de75a985d037b6-dirty"
| author | thanhlv |
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| date | Mon, 31 Jan 2022 11:17:00 +0000 |
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| -1:000000000000 | 0:a33c3356b8cf |
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| 1 # centrifuge_indices.loc.sample | |
| 2 # This is a *.loc.sample file distributed with Galaxy that enables tools | |
| 3 # to use a directory of indexed data files. This one is for GOTTCHA. | |
| 4 # See the wiki: http://wiki.galaxyproject.org/Admin/NGS%20Local%20Setup | |
| 5 # First create these data files and save them in your own data directory structure. | |
| 6 # Then, create a bowtie_indices.loc file to use those indexes with tools. | |
| 7 # Copy this file, save it with the same name (minus the .sample), | |
| 8 # follow the format examples, and store the result in this directory. | |
| 9 # The file should include an one line entry for each index set. | |
| 10 # The path points to the "basename" for the set, not a specific file. | |
| 11 # It has three text columns seperated by TABS. | |
| 12 # | |
| 13 # <unique_id> <display_name> <file_base_path> | |
| 14 # | |
| 15 #bacteria_v20150825 Bacteria /depot/data2/galaxy/gottcha/GOTTCHA_BACTERIA_c4937_k24_u30_xHUMAN3x.species | |
| 16 #viruses_v20150825 Viruses /depot/data2/galaxy/gottcha/GOTTCHA_VIRUSES_c5900_k24_u30_xHUMAN3x.species | |
| 17 test test foo/bar/baz |