Mercurial > repos > thanhlv > fargene
diff test-data/paired/hmmsearchresults/reads_1-class_B_1_2-hmmsearched.out @ 0:6f78bc71eb12 draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/fargene commit 2e1b1f737f3a3d7cfc6350c6936fbb0bd84a5dad-dirty
| author | thanhlv |
|---|---|
| date | Fri, 19 Jul 2019 08:42:37 -0400 |
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| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/paired/hmmsearchresults/reads_1-class_B_1_2-hmmsearched.out Fri Jul 19 08:42:37 2019 -0400 @@ -0,0 +1,332 @@ +# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord +# target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target +#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- +FN396876.1-1280/1_2 - 33 b1_b2_70_centroids-aligned - 248 8.9e-15 54.3 0.1 1 1 2.3e-16 9.2e-15 54.2 0.1 156 188 1 33 1 33 0.97 - +FN396876.1-3896/1_5 - 34 b1_b2_70_centroids-aligned - 248 3.8e-13 48.9 0.1 1 1 9.6e-15 3.9e-13 48.9 0.1 158 190 1 33 1 34 0.96 - +FN396876.1-96/1_3 - 33 b1_b2_70_centroids-aligned - 248 4.3e-13 48.7 0.2 1 1 1.1e-14 4.4e-13 48.7 0.2 156 187 1 32 1 33 0.96 - 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+FN396876.1-3940/1_2 - 33 b1_b2_70_centroids-aligned - 248 0.0085 15.0 0.0 1 1 0.00021 0.0086 15.0 0.0 21 46 7 32 2 33 0.87 - +FN396876.1-2728/1_3 - 33 b1_b2_70_centroids-aligned - 248 0.009 15.0 0.0 1 1 0.00022 0.009 15.0 0.0 118 146 1 29 1 33 0.89 - +FN396876.1-3492/1_2 - 33 b1_b2_70_centroids-aligned - 248 0.011 14.6 0.0 1 1 0.00028 0.011 14.6 0.0 150 167 16 33 2 33 0.80 - +FN396876.1-1728/1_1 - 34 b1_b2_70_centroids-aligned - 248 0.012 14.6 0.0 1 1 0.00029 0.012 14.6 0.0 24 53 3 32 1 34 0.90 - +FN396876.1-2190/1_3 - 33 b1_b2_70_centroids-aligned - 248 0.012 14.5 0.0 1 1 0.0003 0.012 14.5 0.0 118 147 1 30 1 33 0.92 - +FN396876.1-1002/1_6 - 33 b1_b2_70_centroids-aligned - 248 0.013 14.5 0.0 1 1 0.00031 0.013 14.5 0.0 22 46 8 32 2 33 0.88 - +FN396876.1-3454/1_3 - 33 b1_b2_70_centroids-aligned - 248 0.013 14.4 0.0 1 1 0.00033 0.013 14.4 0.0 150 167 15 32 3 33 0.82 - +FN396876.1-1328/1_1 - 34 b1_b2_70_centroids-aligned - 248 0.014 14.4 0.2 1 1 0.00047 0.019 13.9 0.2 89 120 2 33 1 34 0.89 - +FN396876.1-2160/1_2 - 33 b1_b2_70_centroids-aligned - 248 0.014 14.4 0.0 1 1 0.00034 0.014 14.4 0.0 150 167 16 33 2 33 0.81 - +FN396876.1-2772/1_3 - 33 b1_b2_70_centroids-aligned - 248 0.015 14.3 0.0 1 1 0.00036 0.015 14.3 0.0 121 150 1 30 1 33 0.91 - +FN396876.1-876/1_3 - 33 b1_b2_70_centroids-aligned - 248 0.015 14.3 0.0 1 1 0.00036 0.015 14.3 0.0 121 150 1 30 1 33 0.91 - +FN396876.1-452/1_3 - 33 b1_b2_70_centroids-aligned - 248 0.016 14.2 0.0 1 1 0.00039 0.016 14.2 0.0 150 166 16 32 2 33 0.81 - +FN396876.1-3126/1_2 - 33 b1_b2_70_centroids-aligned - 248 0.018 13.9 0.0 1 1 0.00046 0.019 13.9 0.0 221 244 2 25 1 27 0.93 - +FN396876.1-1604/1_3 - 33 b1_b2_70_centroids-aligned - 248 0.018 13.9 0.0 1 1 0.00046 0.019 13.9 0.0 221 244 2 25 1 27 0.93 - +FN396876.1-898/1_1 - 34 b1_b2_70_centroids-aligned - 248 0.02 13.8 0.0 1 1 0.0005 0.02 13.8 0.0 221 244 2 25 1 27 0.93 - +FN396876.1-2126/1_5 - 34 b1_b2_70_centroids-aligned - 248 0.022 13.7 0.0 1 1 0.00057 0.023 13.6 0.0 219 244 1 26 1 28 0.93 - +FN396876.1-1972/1_5 - 34 b1_b2_70_centroids-aligned - 248 0.029 13.3 0.0 1 1 0.00071 0.029 13.3 0.0 38 68 2 32 1 34 0.83 - +FN396876.1-1954/1_1 - 34 b1_b2_70_centroids-aligned - 248 0.034 13.1 0.0 1 1 0.00083 0.034 13.1 0.0 21 49 5 33 1 34 0.88 - +FN396876.1-2378/1_2 - 33 b1_b2_70_centroids-aligned - 248 0.065 12.1 0.0 1 1 0.0016 0.066 12.1 0.0 221 244 2 25 1 27 0.93 - +FN396876.1-2480/1_6 - 33 b1_b2_70_centroids-aligned - 248 0.066 12.1 0.1 1 1 0.0018 0.073 12.0 0.1 161 172 22 33 18 33 0.95 - +# +# Program: hmmsearch +# Version: 3.2.1 (June 2018) +# Pipeline mode: SEARCH +# Query file: /home/ubuntu/data/miniconda2/envs/fargene/lib/python2.7/site-packages/fargene_analysis/models/class_B_1_2.hmm +# Target file: - +# Option settings: hmmsearch --domtblout /home/ubuntu/data/fargene/tutorial/tutorialdata/tutorial_output_1/hmmsearchresults/reads_1-class_B_1_2-hmmsearched.out -E 1000 --domE 1000 /home/ubuntu/data/miniconda2/envs/fargene/lib/python2.7/site-packages/fargene_analysis/models/class_B_1_2.hmm - +# Current dir: /home/ubuntu/data/fargene/tutorial/tutorialdata +# Date: Tue Jul 16 12:47:04 2019 +# [ok]