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view test-data/contigs/hmmsearchresults/klebsiella_plasmid-class_B_1_2-hmmsearched.out @ 0:6f78bc71eb12 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/fargene commit 2e1b1f737f3a3d7cfc6350c6936fbb0bd84a5dad-dirty
author thanhlv
date Fri, 19 Jul 2019 08:42:37 -0400
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#                                                                                  --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name                 accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- -----       -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
FN396876.1_4         -           1439 b1_b2_70_centroids-aligned -            248   1.5e-82  265.4   0.0   1   1   3.3e-83     2e-82  264.9   0.0     7   244   383   634   376   636 0.94 Klebsiella pneumoniae plasmid pKpANDM-1 sequence carrying new metallo-beta-lactamase gene blaNDM-1, isolate KP-05-506
#
# Program:         hmmsearch
# Version:         3.2.1 (June 2018)
# Pipeline mode:   SEARCH
# Query file:      /home/ubuntu/data/miniconda2/envs/fargene/lib/python2.7/site-packages/fargene_analysis/models/class_B_1_2.hmm
# Target file:     -
# Option settings: hmmsearch --domtblout /home/ubuntu/data/fargene/tutorial/tutorialdata/tutorial_output_2/hmmsearchresults/klebsiella_plasmid-class_B_1_2-hmmsearched.out -E 1000 --domE 1000 /home/ubuntu/data/miniconda2/envs/fargene/lib/python2.7/site-packages/fargene_analysis/models/class_B_1_2.hmm - 
# Current dir:     /home/ubuntu/data/fargene/tutorial/tutorialdata
# Date:            Wed Jul 17 13:17:48 2019
# [ok]