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view test-data/paired/hmmsearchresults/orfs-class_B_1_2-hmmsearched.out @ 0:6f78bc71eb12 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/fargene commit 2e1b1f737f3a3d7cfc6350c6936fbb0bd84a5dad-dirty
author thanhlv
date Fri, 19 Jul 2019 08:42:37 -0400
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#                                                                                                                 --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name                                       accession   tlen query name                 accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#                               ------------------- ---------- -----       -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
lcl|NODE_1_length_935_cov_39.160227_seq1:c932-117_1 -            272 b1_b2_70_centroids-aligned -            248   5.2e-85  270.8   0.0   1   1   6.2e-85   6.2e-85  270.6   0.0     7   244    18   269    11   271 0.94 ORF4_NODE_1_length_935_cov_39.160227_seq1:931:116
#
# Program:         hmmsearch
# Version:         3.2.1 (June 2018)
# Pipeline mode:   SEARCH
# Query file:      /home/ubuntu/data/miniconda2/envs/fargene/lib/python2.7/site-packages/fargene_analysis/models/class_B_1_2.hmm
# Target file:     /home/ubuntu/data/fargene/tutorial/tutorialdata/tutorial_output_1/tmpdir/orfs-translated.fasta
# Option settings: hmmsearch --domtblout /home/ubuntu/data/fargene/tutorial/tutorialdata/tutorial_output_1/hmmsearchresults/orfs-class_B_1_2-hmmsearched.out -E 1000 --domE 1000 /home/ubuntu/data/miniconda2/envs/fargene/lib/python2.7/site-packages/fargene_analysis/models/class_B_1_2.hmm /home/ubuntu/data/fargene/tutorial/tutorialdata/tutorial_output_1/tmpdir/orfs-translated.fasta 
# Current dir:     /home/ubuntu/data/fargene/tutorial/tutorialdata
# Date:            Tue Jul 16 12:47:15 2019
# [ok]