annotate galaxy-conf/ZScore.xml @ 9:9266d807ca85

Uploaded
author timpalpant
date Tue, 06 Mar 2012 21:55:46 -0500
parents 4b32ed5d4a1b
children 81d5b81fb3c2
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
4
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
1 <tool id="WigZScore" name="Z-Score" version="1.0.0">
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
2 <description>a (Big)Wig file</description>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
3 <command interpreter="sh">galaxyToolRunner.sh wigmath.ZScore -i $input -o $output</command>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
4 <inputs>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
5 <param format="bigwig,wig" name="input" type="data" label="Z-score the data in" />
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
6 </inputs>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
7 <outputs>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
8 <data format="wig" name="output" metadata_source="input" />
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
9 </outputs>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
10 <tests>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
11 <!--<test>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
12 <param name="input" value="wigmath.input1"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
13 <param name="dbkey" value="sacCer2"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
14 <output name="output" file="zscorer.output1"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
15 </test>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
16 <test>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
17 <param name="input" value="wigmath.input1.bw"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
18 <param name="dbkey" value="sacCer2"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
19 <output name="output" file="zscorer.output1"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
20 </test>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
21 <test>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
22 <param name="input" value="wigmath.input2"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
23 <param name="dbkey" value="sacCer2"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
24 <output name="output" file="zscorer.output2"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
25 </test>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
26 <test>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
27 <param name="input" value="wigmath.input2.bw"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
28 <param name="dbkey" value="sacCer2"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
29 <output name="output" file="zscorer.output2"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
30 </test>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
31 <test>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
32 <param name="input" value="wigmath.input3"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
33 <param name="dbkey" value="sacCer2"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
34 <output name="output" file="zscorer.output3"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
35 </test>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
36 <test>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
37 <param name="input" value="wigmath.input3.bw"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
38 <param name="dbkey" value="sacCer2"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
39 <output name="output" file="zscorer.output3"/>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
40 </test>-->
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
41 </tests>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
42 </tool>