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4
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1 <tool id="Autocorrelation" name="Compute the autocorrelation" version="1.0.0">
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2 <description>on data in a Wiggle file</description>
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3 <command interpreter="sh">galaxyToolRunner.sh ngs.Autocorrelation -i $input -l $windows -m $max -o $output</command>
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4 <inputs>
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5 <param format="bigwig,wig" name="input" type="data" label="Input data" />
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6 <param format="bed,bedgraph,gff" name="windows" type="data" label="List of intervals" />
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7 <param name="max" type="integer" value="200" label="Maximum shift" />
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8 </inputs>
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9 <outputs>
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10 <data format="tabular" name="output" />
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11 </outputs>
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12
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13 <help>
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14 .. class:: warningmark
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15
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16 This tool requires Wiggle/BigWig input data.
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17 </help>
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18 </tool>
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