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1 <tool id="WaveletTransform" name="Wavelet analysis" version="1.0.0">
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2 <description>across a genomic interval</description>
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3 <command interpreter="sh">galaxyToolRunner.sh ngs.WaveletTransform -i $input -w $wavelet --chr $chr --start $start --stop $stop --min $min --max $max --step $N -o $output</command>
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4 <inputs>
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5 <param format="wig,bigwig" name="input" type="data" label="Sequencing data" />
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6 <param format="tabular" name="wavelet" type="data" label="Wavelet" />
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7 <param name="chr" type="text" label="Chromosome" />
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8 <param name="start" type="integer" value="1" label="Start base pair" />
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9 <param name="stop" type="integer" value="1000" label="Stop base pair" />
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10 <param name="min" type="integer" value="10" label="Minimum wavelet size (bp)" />
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11 <param name="max" type="integer" value="400" label="Maximum wavelet size (bp)" />
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12 <param name="N" type="integer" value="1" label="Step size (bp)" />
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13 </inputs>
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14 <outputs>
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15 <data format="tabular" name="output" />
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16 </outputs>
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17
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18 <help>
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19
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20 </help>
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21 </tool>
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