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comparison galaxy-conf/IntervalAverager.xml @ 15:3e477c7e0e73 draft

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Update normalization tools to allow normalizing by chromosome (Z-scorer, scale, etc.) Add new tool to convert any interval file to Bed format. Miscellaneous bug fixes.
author timpalpant
date Sat, 09 Jun 2012 16:03:59 -0400
parents eb53be9a09f4
children
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14:f58706d4d421 15:3e477c7e0e73
1 <tool id="IntervalAverager" name="Average intervals" version="1.0.0"> 1 <tool id="IntervalAverager" name="Average intervals" version="2.1.0">
2 <description>that have been aligned</description> 2 <description>that have been aligned</description>
3 <command interpreter="sh"> 3 <command interpreter="sh">
4 galaxyToolRunner.sh visualization.IntervalAverager -l $loci -o $output $file1 4 galaxyToolRunner.sh visualization.IntervalAverager -l $loci -o $output $file1
5 #for $input in $inputs 5 #for $input in $inputs
6 ${input.file} 6 ${input.file}