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comparison galaxy-conf/ValueDistribution.xml @ 15:3e477c7e0e73 draft

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Update normalization tools to allow normalizing by chromosome (Z-scorer, scale, etc.) Add new tool to convert any interval file to Bed format. Miscellaneous bug fixes.
author timpalpant
date Sat, 09 Jun 2012 16:03:59 -0400
parents 81d5b81fb3c2
children
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14:f58706d4d421 15:3e477c7e0e73
1 <tool id="ValueDistribution" name="Compute the value distribution" version="1.0.0"> 1 <tool id="WigValueDistribution" name="Compute the value distribution" version="1.1.0">
2 <description>of a (Big)Wig file</description> 2 <description>of a (Big)Wig file</description>
3 <command interpreter="sh">galaxyToolRunner.sh wigmath.ValueDistribution -i $input 3 <command interpreter="sh">galaxyToolRunner.sh wigmath.ValueDistribution -i $input
4 #if str( $min ) != '' 4 #if str( $min ) != ''
5 --min $min 5 --min $min
6 #end if 6 #end if