Mercurial > repos > timpalpant > java_genomics_toolkit
comparison galaxy-conf/galaxyToolRunner.sh @ 4:4b32ed5d4a1b
Uploaded
| author | timpalpant |
|---|---|
| date | Tue, 14 Feb 2012 00:59:33 -0500 |
| parents | |
| children | eb53be9a09f4 |
comparison
equal
deleted
inserted
replaced
| 3:4b610dc8f6ba | 4:4b32ed5d4a1b |
|---|---|
| 1 #!/usr/bin/env bash | |
| 2 | |
| 3 if [ $# -eq 0 ] | |
| 4 then | |
| 5 echo "USAGE: galaxyToolRunner.sh APPNAME [ARGS]"; | |
| 6 exit; | |
| 7 fi | |
| 8 | |
| 9 if [ "$1" = "list" ] | |
| 10 then | |
| 11 find src/edu/unc/genomics/**/*.java -exec basename -s .java {} \; | |
| 12 fi | |
| 13 | |
| 14 DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )" | |
| 15 java -Dlog4j.configuration=log4j.properties -cp $DIR:$DIR/../build:$DIR/../dist/*:$DIR/../lib/* edu.unc.genomics."$@" |