Mercurial > repos > timpalpant > java_genomics_toolkit
comparison galaxy-conf/PairOverlappingNucleosomes.xml @ 18:b2a69d34385a draft
Performance improvements to Wig file checksumming. Bug fix in Autocorrelation tool.
author | timpalpant |
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date | Fri, 15 Jun 2012 15:07:33 -0400 |
parents | |
children | b43c420a6135 |
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17:ace7855c1017 | 18:b2a69d34385a |
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1 <tool id="PairNukes" name="Pair nucleosomes" version="1.0.0"> | |
2 <description>by overlap</description> | |
3 <command interpreter="sh">galaxyToolRunner.sh nucleosomes.PairOverlappingNucleosomes -a $input1 -b $input2 -m $N -o $output</command> | |
4 <inputs> | |
5 <param name="input1" type="data" format="tabular" label="Nucleosome calls 1" /> | |
6 <param name="input2" type="data" format="tabular" label="Nucleosome calls 2" /> | |
7 <param name="N" type="integer" value="73" label="Minimum overlap (bp)" /> | |
8 </inputs> | |
9 <outputs> | |
10 <data name="output" format="tabular" /> | |
11 </outputs> | |
12 | |
13 <help> | |
14 | |
15 This tool will pair overlapping nucleosomes from two sets of nucleosome calls. In the event that multiple calls overlap, the one with the largest overlap is selected as a match. | |
16 | |
17 </help> | |
18 </tool> |