Mercurial > repos > timpalpant > java_genomics_toolkit

comparison galaxy-conf/IntervalToWig.xml @ 13:eb53be9a09f4 draft

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author timpalpant
date Sat, 19 May 2012 10:36:45 -0400
parents 81d5b81fb3c2
children 3e477c7e0e73
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12:81d5b81fb3c2 13:eb53be9a09f4
1 <tool id="BedToWig" name="Interval to Wig" version="1.0.0"> 1 <tool id="BedToWig" name="Interval to Wig" version="1.0.0">
2 <description>converter</description> 2 <description>converter</description>
3 <command interpreter="sh">galaxyToolRunner.sh converters.IntervalToWig -i $input $zero -a ${chromInfo} -o $output</command> 3 <command interpreter="sh">galaxyToolRunner.sh converters.IntervalToWig -i $input $zero -a ${chromInfo} -o $output</command>
4 <inputs> 4 <inputs>
5 <param name="input" type="data" format="bed,bedGraph,gff" label="Input Bed/BedGraph/GFF file" /> 5 <param name="input" type="data" format="bed,bedgraph,gff" label="Input Bed/BedGraph/GFF file" />
6 <param name="zero" type="boolean" checked="false" truevalue="-z" falsevalue="" label="Assume zero where there is no data (default is NaN)" /> 6 <param name="zero" type="boolean" checked="false" truevalue="-z" falsevalue="" label="Assume zero where there is no data (default is NaN)" />
7 </inputs> 7 </inputs>
8 <outputs> 8 <outputs>
9 <data name="output" format="wig" metadata_source="input" /> 9 <data name="output" format="wig" metadata_source="input" />
10 </outputs> 10 </outputs>