Mercurial > repos > timpalpant > java_genomics_toolkit
comparison galaxy-conf/WaveletTransform.xml @ 13:eb53be9a09f4 draft
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| author | timpalpant |
|---|---|
| date | Sat, 19 May 2012 10:36:45 -0400 |
| parents | |
| children | 3e477c7e0e73 |
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| 12:81d5b81fb3c2 | 13:eb53be9a09f4 |
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| 1 <tool id="WaveletTransform" name="Wavelet analysis" version="1.0.0"> | |
| 2 <description>across a genomic interval</description> | |
| 3 <command interpreter="sh">galaxyToolRunner.sh ngs.WaveletTransform -i $input -w $wavelet --chr $chr --start $start --stop $stop --min $min --max $max --step $N -o $output</command> | |
| 4 <inputs> | |
| 5 <param format="wig,bigwig" name="input" type="data" label="Sequencing data" /> | |
| 6 <param format="tabular" name="wavelet" type="data" label="Wavelet" /> | |
| 7 <param name="chr" type="text" label="Chromosome" /> | |
| 8 <param name="start" type="integer" value="1" label="Start base pair" /> | |
| 9 <param name="stop" type="integer" value="1000" label="Stop base pair" /> | |
| 10 <param name="min" type="integer" value="10" label="Minimum wavelet size (bp)" /> | |
| 11 <param name="max" type="integer" value="400" label="Maximum wavelet size (bp)" /> | |
| 12 <param name="N" type="integer" value="1" label="Step size (bp)" /> | |
| 13 </inputs> | |
| 14 <outputs> | |
| 15 <data format="tabular" name="output" /> | |
| 16 </outputs> | |
| 17 | |
| 18 <help> | |
| 19 | |
| 20 </help> | |
| 21 </tool> |