Mercurial > repos > timpalpant > java_genomics_toolkit

comparison galaxy-conf/ExtractDataFromRegion.xml @ 25:b43c420a6135 draft default tip

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Incorporate fix: https://github.com/timpalpant/java-genomics-toolkit/commit/9a6c61b7c6b8d85a1cd3f595eed657a537b85dc9
author timpalpant
date Sat, 09 Feb 2019 14:02:24 -0500
parents 3e477c7e0e73
children
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24:a77e126ae856 25:b43c420a6135
1 <tool id="ExtractDataFromWig" name="Extract data from a Wig file" version="1.0.0"> 1 <tool id="ExtractDataFromWig" name="Extract data from a Wig file" version="1.0.0">
2 <description>for a genomic interval</description> 2 <description>for a genomic interval</description>
3 <command interpreter="sh"> 3 <command interpreter="bash">
4 galaxyToolRunner.sh ngs.ExtractDataFromRegion --chr $chr --start $start --stop $stop -o $output $file1 4 galaxyToolRunner.sh ngs.ExtractDataFromRegion --chr $chr --start $start --stop $stop -o $output $file1
5 #for $input in $inputs 5 #for $input in $inputs
6 ${input.file} 6 ${input.file}
7 #end for 7 #end for
8 </command> 8 </command>