Mercurial > repos > timpalpant > java_genomics_toolkit
comparison galaxy-conf/IntervalToWig.xml @ 25:b43c420a6135 draft default tip
Incorporate fix: https://github.com/timpalpant/java-genomics-toolkit/commit/9a6c61b7c6b8d85a1cd3f595eed657a537b85dc9
author | timpalpant |
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date | Sat, 09 Feb 2019 14:02:24 -0500 |
parents | 9d56b5b85740 |
children |
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24:a77e126ae856 | 25:b43c420a6135 |
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1 <tool id="BedToWig" name="Bed/BedGraph/GFF to Wig" version="1.1.0"> | 1 <tool id="BedToWig" name="Bed/BedGraph/GFF to Wig" version="1.1.0"> |
2 <description>converter</description> | 2 <description>converter</description> |
3 <command interpreter="sh">galaxyToolRunner.sh converters.IntervalToWig -i $input $zero -a ${chromInfo} -o $output</command> | 3 <command interpreter="bash">galaxyToolRunner.sh converters.IntervalToWig -i $input $zero -a ${chromInfo} -o $output</command> |
4 <inputs> | 4 <inputs> |
5 <param name="input" type="data" format="bed,bedgraph,gff" label="Input Bed/BedGraph/GFF file" /> | 5 <param name="input" type="data" format="bed,bedgraph,gff" label="Input Bed/BedGraph/GFF file" /> |
6 <param name="zero" type="boolean" checked="false" truevalue="-z" falsevalue="" label="Assume zero where there is no data (default is NaN)" /> | 6 <param name="zero" type="boolean" checked="false" truevalue="-z" falsevalue="" label="Assume zero where there is no data (default is NaN)" /> |
7 </inputs> | 7 </inputs> |
8 <outputs> | 8 <outputs> |