Mercurial > repos > timpalpant > java_genomics_toolkit

diff galaxy-conf/IntervalLengthDistribution.xml @ 15:3e477c7e0e73 draft

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Update normalization tools to allow normalizing by chromosome (Z-scorer, scale, etc.) Add new tool to convert any interval file to Bed format. Miscellaneous bug fixes.
author timpalpant
date Sat, 09 Jun 2012 16:03:59 -0400
parents eb53be9a09f4
children
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--- a/galaxy-conf/IntervalLengthDistribution.xml	Sat May 19 10:40:16 2012 -0400
+++ b/galaxy-conf/IntervalLengthDistribution.xml	Sat Jun 09 16:03:59 2012 -0400
@@ -8,6 +8,23 @@
   <outputs>
       <data format="tabular" name="output" />
   </outputs>
+  <tests>
+    <test>
+      <param name="input" value="test.bed"/>
+      <param name="freq" value="false"/>
+	    <output name="output" file="intervallengthdistribution1.txt"/>
+    </test>
+    <test>
+      <param name="input" value="test.bed"/>
+      <param name="freq" value="true"/>
+	    <output name="output" file="intervallengthdistribution2.txt"/>
+    </test>
+    <test>
+      <param name="input" value="test2.bed"/>
+      <param name="freq" value="false"/>
+	    <output name="output" file="intervallengthdistribution3.txt"/>
+    </test>
+  </tests>
   
 <help>