Mercurial > repos > timpalpant > java_genomics_toolkit

diff galaxy-conf/IntervalStats.xml @ 22:727fbba02ef7 draft

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Fix a bug in GeneTrackToWig where +/- strands were not merged correctly. Add option to vary the chunk size of tools that process chromosomes in chunks.
author timpalpant
date Tue, 19 Jun 2012 22:09:23 -0400
parents 9d56b5b85740
children
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--- a/galaxy-conf/IntervalStats.xml	Mon Jun 18 14:50:31 2012 -0400
+++ b/galaxy-conf/IntervalStats.xml	Tue Jun 19 22:09:23 2012 -0400
@@ -1,5 +1,5 @@
 <tool id="IntervalStats" name="Compute mean/min/max of intervals" version="1.0.0">
-  <description>of data in a Wiggle file</description>
+  <description>of data in a (Big)Wig file</description>
   <command interpreter="sh">
     galaxyToolRunner.sh ngs.IntervalStats -l $windows -s $stat -o $output
       #for $input in $inputs
@@ -7,7 +7,7 @@
       #end for
   </command>
   <inputs>
-      <repeat name="inputs" title="BigWig file">
+      <repeat name="inputs" title="(Big)Wig file">
         <param name="file" type="data" format="bigwig,wig" />
       </repeat>
       <param format="bed,bedgraph,gff" name="windows" type="data" label="List of intervals" />