Mercurial > repos > timpalpant > java_genomics_toolkit

diff galaxy-conf/ZScore.xml @ 22:727fbba02ef7 draft

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Fix a bug in GeneTrackToWig where +/- strands were not merged correctly. Add option to vary the chunk size of tools that process chromosomes in chunks.
author timpalpant
date Tue, 19 Jun 2012 22:09:23 -0400
parents 9d56b5b85740
children
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--- a/galaxy-conf/ZScore.xml	Mon Jun 18 14:50:31 2012 -0400
+++ b/galaxy-conf/ZScore.xml	Tue Jun 19 22:09:23 2012 -0400
@@ -3,7 +3,7 @@
   <command interpreter="sh">galaxyToolRunner.sh wigmath.ZScore -i $input $chr -o $output</command>
   <inputs>
       <param format="bigwig,wig" name="input" type="data" label="Z-score the data in" />
-      <param name="chr" type="boolean" checked="false" truevalue="-c" falsevalue="" label="Z-score chromosomes individually" />
+      <param name="chr" type="boolean" checked="false" truevalue="--bychr" falsevalue="" label="Z-score chromosomes individually" />
   </inputs>
   <outputs>
       <data format="wig" name="output" metadata_source="input" />