--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/gui/edu/unc/genomics/AssemblyTableModel.java	Mon Feb 13 22:12:06 2012 -0500
@@ -0,0 +1,97 @@
+package edu.unc.genomics;
+
+import java.util.List;
+
+import javax.swing.table.AbstractTableModel;
+
+/**
+ * Model for the AssemblyManagerDialog table view
+ * 
+ * @author timpalpant
+ *
+ */
+public class AssemblyTableModel extends AbstractTableModel {
+	
+	private static final long serialVersionUID = 8225453782461913732L;
+	
+	private static final String[] COLUMN_NAMES = { "Name", "# Contigs" };
+	
+	private final List<Assembly> assemblies;
+	
+	public AssemblyTableModel(List<Assembly> assemblies) {
+		this.assemblies = assemblies;
+	}
+	
+	/* (non-Javadoc)
+	 * @see javax.swing.table.AbstractTableModel#getColumnName(int)
+	 */
+	@Override
+	public String getColumnName(int col) {
+    return COLUMN_NAMES[col];
+	}
+	
+	/* (non-Javadoc)
+	 * @see javax.swing.table.AbstractTableModel#isCellEditable(int, int)
+	 */
+	@Override
+	public boolean isCellEditable(int row, int col) { 
+		return false; 
+	}
+
+	/* (non-Javadoc)
+	 * @see javax.swing.table.TableModel#getRowCount()
+	 */
+	@Override
+	public int getRowCount() {
+		return assemblies.size();
+	}
+
+	/* (non-Javadoc)
+	 * @see javax.swing.table.TableModel#getColumnCount()
+	 */
+	@Override
+	public int getColumnCount() {
+		return 2;
+	}
+
+	/* (non-Javadoc)
+	 * @see javax.swing.table.TableModel#getValueAt(int, int)
+	 */
+	@Override
+	public Object getValueAt(int rowIndex, int columnIndex) {
+		Assembly a = assemblies.get(rowIndex);
+		if (columnIndex == 0) {
+			return a.toString();
+		} else if (columnIndex == 1) {
+			return a.chromosomes().size();
+		} else {
+			return null;
+		}
+	}
+	
+	public Assembly getRow(int rowIndex) {
+		return assemblies.get(rowIndex);
+	}
+	
+	public boolean containsAssembly(Assembly a) {
+		String aName = a.toString();
+		for (Assembly assembly : assemblies) {
+			if (assembly.toString().equalsIgnoreCase(aName)) {
+				return true;
+			}
+		}
+		
+		return false;
+	}
+	
+	public void addAssembly(Assembly a) {
+		assemblies.add(a);
+		fireTableRowsInserted(assemblies.size()-1, assemblies.size()-1);
+	}
+	
+	public void removeRow(int rowIndex) {
+		assemblies.remove(rowIndex);
+		fireTableRowsDeleted(rowIndex, rowIndex);
+	}
+
+}