Mercurial > repos > timpalpant > java_genomics_toolkit

diff galaxy-conf/GaussianSmooth.xml @ 25:b43c420a6135 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Incorporate fix: https://github.com/timpalpant/java-genomics-toolkit/commit/9a6c61b7c6b8d85a1cd3f595eed657a537b85dc9
author timpalpant
date Sat, 09 Feb 2019 14:02:24 -0500
parents 9d56b5b85740
children
line wrap: on
line diff
--- a/galaxy-conf/GaussianSmooth.xml	Tue Jun 19 22:15:09 2012 -0400
+++ b/galaxy-conf/GaussianSmooth.xml	Sat Feb 09 14:02:24 2019 -0500
@@ -1,6 +1,6 @@
 <tool id="WigGaussianSmooth" name="Gaussian smooth" version="1.1.0">
   <description>a (Big)Wig file</description>
-  <command interpreter="sh">galaxyToolRunner.sh wigmath.GaussianSmooth -i $input -s $S -o $output</command>
+  <command interpreter="bash">galaxyToolRunner.sh wigmath.GaussianSmooth -i $input -s $S -o $output</command>
   <inputs>
       <param name="input" type="data" format="bigwig,wig" label="Smooth the data in" />
       <param name="S" type="integer" value="20" optional="true" label="Standard deviation of the Gaussian in base pairs" />