view galaxy-conf/LogTransform.xml @ 4:4b32ed5d4a1b

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author timpalpant
date Tue, 14 Feb 2012 00:59:33 -0500
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children 81d5b81fb3c2
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<tool id="Logger" name="Log transform" version="1.0.0">
  <description>a (Big)Wig file</description>
  <command interpreter="sh">galaxyToolRunner.sh wigmath.LogTransform -i $input -b $base -o $output</command>
  <inputs>
    <param format="bigwig,wig" name="input" type="data" label="(Big)Wig file" />
    <param name="base" type="integer" value="2" label="Logarithm base" />
  </inputs>
  <outputs>
    <data format="wig" name="output" metadata_source="input" />
  </outputs>
  <tests>
    <!--<test>
	    <param name="input" value="wigmath.input1"/>
	    <param name="base" value="2"/>
	    <param name="dbkey" value="sacCer2"/>
	    <output name="output" file="logger.output1"/>
	  </test>
	  <test>
	    <param name="input" value="wigmath.input1.bw"/>
	    <param name="base" value="2"/>
	    <param name="dbkey" value="sacCer2"/>
	    <output name="output" file="logger.output1"/>
	  </test>
	  <test>
	    <param name="input" value="wigmath.input2"/>
	    <param name="base" value="2"/>
	    <param name="dbkey" value="sacCer2"/>
	    <output name="output" file="logger.output2"/>
	  </test>
	  <test>
	    <param name="input" value="wigmath.input2.bw"/>
	    <param name="base" value="2"/>
	    <param name="dbkey" value="sacCer2"/>
	    <output name="output" file="logger.output2"/>
	  </test>
	  <test>
	    <param name="input" value="wigmath.input3"/>
	    <param name="base" value="10"/>
	    <param name="dbkey" value="sacCer2"/>
	    <output name="output" file="logger.output3"/>
	  </test>
	  <test>
	    <param name="input" value="wigmath.input3.bw"/>
	    <param name="base" value="10"/>
	    <param name="dbkey" value="sacCer2"/>
	    <output name="output" file="logger.output3"/>
	  </test>-->
  </tests>
  
  <help>
  </help>
</tool>