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view galaxy-conf/galaxyToolRunner.sh @ 25:b43c420a6135 draft default tip

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Incorporate fix: https://github.com/timpalpant/java-genomics-toolkit/commit/9a6c61b7c6b8d85a1cd3f595eed657a537b85dc9
author timpalpant
date Sat, 09 Feb 2019 14:02:24 -0500
parents 9d56b5b85740
children
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#!/usr/bin/env bash

if [ $# -eq 0 ]
then
  echo "USAGE: galaxyToolRunner.sh APPNAME [ARGS]";
  exit;
fi

DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
java -Dlog4j.configuration=log4j.properties -cp $DIR:$DIR/../build:$DIR/../dist/*:$DIR/../lib/* edu.unc.genomics."$@"