view galaxy-conf/Average.xml @ 25:b43c420a6135 draft default tip

Incorporate fix: https://github.com/timpalpant/java-genomics-toolkit/commit/9a6c61b7c6b8d85a1cd3f595eed657a537b85dc9
author timpalpant
date Sat, 09 Feb 2019 14:02:24 -0500
parents 9d56b5b85740
children
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<tool id="WigAvg" name="Average" version="1.1.0">
  <description>multiple (Big)Wig files</description>
  <command interpreter="bash">
    galaxyToolRunner.sh wigmath.Average -o $output $file1 $file2
      #for $input in $inputs
        ${input.file}
      #end for
  </command>
  <inputs>
      <param name="file1" label="(Big)Wig file 1" type="data" format="bigwig,wig" />
      <param name="file2" label="(Big)Wig file 2" type="data" format="bigwig,wig" />
      <repeat name="inputs" title="Additional (Big)Wig file">
        <param name="file" type="data" format="bigwig,wig" />
      </repeat>
  </inputs>
  <outputs>
      <data format="wig" name="output" />
  </outputs>
  <tests>
	  <!-- TODO -->
  </tests>


<help>

This tool will average the values of the provided Wig files, base pair by base pair.

.. class:: infomark

**TIP:** If your dataset does not appear in the pulldown menu, it means that it is not in Wig or BigWig format. Use "edit attributes" to set the correct format if it was not detected correctly.

</help>
</tool>