Mercurial > repos > timpalpant > java_genomics_toolkit
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Fix a bug in GeneTrackToWig where +/- strands were not merged correctly. Add option to vary the chunk size of tools that process chromosomes in chunks. draftTue, 19 Jun 2012 22:09:23 -0400, by timpalpant
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Reuploaded to see if tools get loaded correctly this time. draftFri, 15 Jun 2012 15:10:26 -0400, by timpalpant
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Performance improvements to Wig file checksumming. Bug fix in Autocorrelation tool. draftFri, 15 Jun 2012 15:07:33 -0400, by timpalpant
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Add back tool_data_table_conf.xml.sample since apparently it's still needed. draftSat, 09 Jun 2012 16:10:42 -0400, by timpalpant
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Add sam_fa_indices.loc.sample to enable DNAProperty and FindNMer tools that require samtools indices to be installed. draftSat, 09 Jun 2012 16:06:25 -0400, by timpalpant
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Update normalization tools to allow normalizing by chromosome (Z-scorer, scale, etc.) Add new tool to convert any interval file to Bed format. Miscellaneous bug fixes. draftSat, 09 Jun 2012 16:03:59 -0400, by timpalpant
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Added help for all tools in the toolkit. Many bug fixes and a few new nucleosome tools. draftWed, 25 Apr 2012 16:53:48 -0400, by timpalpant
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UploadedMon, 09 Apr 2012 11:50:23 -0400, by timpalpant
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UploadedSat, 17 Mar 2012 08:11:55 -0400, by timpalpant
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UploadedTue, 06 Mar 2012 21:55:46 -0500, by timpalpant