--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/smalt/Dockerfile	Tue Mar 08 11:43:08 2022 +0000
@@ -0,0 +1,26 @@
+# Galaxy - SMALT
+# From https://toolshed.g2.bx.psu.edu/repository/view_repository?sort=Repository.name&operation=view_or_manage_repository&changeset_revision=54855bd8d107&id=ec70d959cc6d865d
+
+FROM debian:wheezy
+
+MAINTAINER Aaron Petkau, aaron.petkau@gmail.com
+
+# make sure the package repository is up to date
+RUN DEBIAN_FRONTEND=noninteractive apt-get -qq update
+
+RUN DEBIAN_FRONTEND=noninteractive apt-get install -y python
+RUN DEBIAN_FRONTEND=noninteractive apt-get install -y wget
+RUN DEBIAN_FRONTEND=noninteractive apt-get install -y mercurial
+
+RUN mkdir /tmp/smalt
+WORKDIR /tmp/smalt
+
+RUN wget ftp://ftp.sanger.ac.uk/pub4/resources/software/smalt/smalt-0.7.3.tgz
+RUN tar -xvvzf smalt-0.7.3.tgz
+RUN cp smalt-0.7.3/smalt_x86_64 /usr/bin/smalt_unknown
+
+RUN hg clone https://toolshed.g2.bx.psu.edu/repos/cjav/smalt smalt_deps
+RUN cp smalt_deps/smalt_wrapper.py /usr/bin/smalt_wrapper.py
+RUN chmod a+x /usr/bin/smalt_wrapper.py
+
+RUN apt-get clean && rm -rf /tmp/smalt && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*