0
|
1 <tool id="py2_patch_test" name="py2" version="0.1.0">
|
|
2 <requirements>
|
|
3 <requirement type="package" version="1.0.0">bowtie</requirement>
|
|
4 </requirements>
|
|
5 <command detect_errors="exit_code"><![CDATA[
|
|
6 python2 '$__tool_directory__/script.py' -a '$input1' > '$output1'
|
|
7 ]]></command>
|
|
8 <inputs>
|
|
9 <param type="data" name="input1" format="txt" />
|
|
10 </inputs>
|
|
11 <outputs>
|
|
12 <data name="output1" format="txt" />
|
|
13 </outputs>
|
|
14 <tests>
|
|
15 <test>
|
|
16 <param name="input1" value="input.txt"/>
|
|
17 <output name="output1" file="output.txt"/>
|
|
18 </test>
|
|
19 </tests>
|
|
20 <help><![CDATA[
|
|
21 TODO: Fill in help.
|
|
22 ]]></help>
|
|
23 </tool>
|
|
24
|