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annotate tool-data/cravat_tissues.loc.sample @ 3:b591b35283e4 draft default tip

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author trinity_ctat
date Wed, 14 Nov 2018 12:34:06 -0500
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1 Bladder Bladder Urothelial Carcinoma BLCA (TCGA) Jun 2013
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2 Blood-Lymphocyte Chronic Lymphocytic Leukemia CLL (ICGC) Mar 2013
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3 Blood-Myeloid Acute Myeloid Leukemia LAML (TCGA) Jun 2013
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4 Brain-Cerebellum Medulloblastoma MB (mixed source) Dec 2010
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5 Brain-Glioblastoma-Multiforme Glioblastoma Multiforme GBM (TCGA) Jun 2013
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6 Brain-Lower-Grade-Glioma Brain Lower Grade Glioma LGG (TCGA) Jun 2013
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7 Breast Breast Invasive Carcinoma BRCA (TCGA) Jun 12012
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8 Cervix Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma CESC (TCGA) Jun 2013
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9 Colon Colon Adenocarcinoma COAD (TCGA) Jun 2013
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10 Head and Neck Head and Neck Squamous Cell Carcinoma HNSC (TCGA) Jun 2013
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11 Kidney-Chromophobe Kidney Chromophobe KICH (TCGA) Jun 2013
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12 Kidney-Clear-Cell Kidney Renal Clear Cell Carcinoma KIRC (TCGA) Jun 2013
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13 Kidney-Papillary-Cell Kidney Renal Papillary Cell Carcinoma KIRP (TCGA) Jun 2013
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14 Liver-Nonviral Hepatocellular Carcinoma (Secondary to Alcohol and Adiposity) HCCA (ICGC) Mar 2013
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15 Liver-Viral Hepatocellular Carcinoma (Viral) HCCV (ICGC) Mar 2013
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16 Lung-Adenocarcinoma Lung Adenocarcinoma LUAD (TCGA) Jun 2013
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17 Lung-Squamous Cell Lung Squamous Cell Carcinoma LUSC (TCGA) Jun 2013
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18 Melanoma Melanoma ML (Yardena Samuels lab) Dec 2011
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19 Other General purpose OV (TCGA) Jun 2013
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20 Ovary Ovarian Serous Cystadenocarcinoma OV (TCGA) Jun 2013
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21 Pancreas Pancreatic Cancer PNCC (ICGC)) Mar 2013
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22 Prostate-Adenocarcinoma Prostate Adenocarcinoma PRAD (TCGA) Jun 2013
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23 Rectum Rectum Adenocarcinoma READ (TCGA) Jun 2013
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24 Skin Skin Cutaneous Melanoma SKCM (TCGA) Jun 2013
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25 Stomach Stomach Adenocarcinoma STAD (TCGA) Jun 2013
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26 Thyroid Thyroid Carcinoma THCA (TCGA) Jun 2013
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27 Uterus Uterine Corpus Endometriod Carcinoma UCEC (TCGA) Jun 2013