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diff tool-data/cravat_tissues.loc.sample @ 3:b591b35283e4 draft default tip

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author trinity_ctat
date Wed, 14 Nov 2018 12:34:06 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/cravat_tissues.loc.sample	Wed Nov 14 12:34:06 2018 -0500
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+Bladder   Bladder Urothelial Carcinoma  BLCA (TCGA)   Jun 2013
+Blood-Lymphocyte  Chronic Lymphocytic Leukemia  CLL (ICGC)  Mar 2013
+Blood-Myeloid   Acute Myeloid Leukemia  LAML (TCGA)   Jun 2013
+Brain-Cerebellum  Medulloblastoma   MB (mixed source)   Dec 2010
+Brain-Glioblastoma-Multiforme   Glioblastoma Multiforme   GBM (TCGA)  Jun 2013
+Brain-Lower-Grade-Glioma  Brain Lower Grade Glioma  LGG (TCGA)  Jun 2013
+Breast  Breast Invasive Carcinoma BRCA (TCGA) Jun 12012
+Cervix  Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma  CESC (TCGA) Jun 2013
+Colon Colon Adenocarcinoma  COAD (TCGA) Jun 2013
+Head and Neck Head and Neck Squamous Cell Carcinoma HNSC (TCGA) Jun 2013
+Kidney-Chromophobe  Kidney Chromophobe  KICH (TCGA) Jun 2013
+Kidney-Clear-Cell Kidney Renal Clear Cell Carcinoma KIRC (TCGA) Jun 2013
+Kidney-Papillary-Cell Kidney Renal Papillary Cell Carcinoma KIRP (TCGA) Jun 2013
+Liver-Nonviral  Hepatocellular Carcinoma (Secondary to Alcohol and Adiposity) HCCA (ICGC) Mar 2013
+Liver-Viral Hepatocellular Carcinoma (Viral)  HCCV (ICGC) Mar 2013
+Lung-Adenocarcinoma Lung Adenocarcinoma LUAD (TCGA) Jun 2013
+Lung-Squamous Cell  Lung Squamous Cell Carcinoma  LUSC (TCGA) Jun 2013
+Melanoma  Melanoma  ML (Yardena Samuels lab)  Dec 2011
+Other  General purpose  OV (TCGA) Jun 2013
+Ovary Ovarian Serous Cystadenocarcinoma OV (TCGA) Jun 2013
+Pancreas  Pancreatic Cancer PNCC (ICGC))  Mar 2013
+Prostate-Adenocarcinoma Prostate Adenocarcinoma PRAD (TCGA) Jun 2013
+Rectum  Rectum Adenocarcinoma READ (TCGA) Jun 2013
+Skin  Skin Cutaneous Melanoma SKCM (TCGA) Jun 2013
+Stomach Stomach Adenocarcinoma  STAD (TCGA) Jun 2013
+Thyroid Thyroid Carcinoma THCA (TCGA) Jun 2013
+Uterus  Uterine Corpus Endometriod Carcinoma  UCEC (TCGA) Jun 2013