Mercurial > repos > ucsb-phylogenetics > osiris_phylogenetics
annotate orthologs/ucsb_hamster/lib/wisecfg/pombe.gf @ 0:5b9a38ec4a39 draft default tip
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author | osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> |
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date | Tue, 11 Mar 2014 12:19:13 -0700 |
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1 # Splice sites and intron regions information for GeneWise-21 |
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2 # Fri May 15 13:20:38 IDT 1998 |
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3 # Created by Mor Amitai (mor@compugen.co.il) |
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4 # dataset : ~/ftp/pub/PomBase/temp/cds_cdna ~/ftp/pub/PomBase/temp/cds_ex |
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5 # Consensi are read from top down. The value, for a sequence, |
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6 # is the number in the line of the first consensus that |
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7 # matches the sequence. |
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8 # Note: the set of sequences that are represented by a consensus |
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9 # are all the sequences that match this consensus and none of the |
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10 # previous consensi |
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11 # |
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12 # the numbers in types 5SS, 3SS, CDS, and the emissions are the number of |
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13 # occurrences of each sequence in the database. |
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14 # In case of a consensus this is the number of occurrences of sequences |
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15 # that are represented by the consensus in the database divided by the |
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16 # number of sequences that are represented by the consensus. |
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17 # *stay_prob is the probability of the transition from the state to itself. |
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18 # No_Spacer_Prob is the probability of transition from Pyrimidine directly |
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19 # to 3SS (no spacer). |
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20 type 5SS |
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21 center 3 |
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22 phase all |
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23 begin consensus |
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24 ---GTA-GT- 0.0869141 |
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25 ---GT----- 0.000821553 |
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26 end consensus |
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27 type 5SS |
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28 center 3 |
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29 phase 0 |
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30 begin consensus |
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31 ---GTA-GT- 0.0371094 |
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32 ---GT----- 0.000356523 |
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33 end consensus |
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34 type 5SS |
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35 center 3 |
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36 phase 1 |
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37 begin consensus |
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38 ---GTA-GT- 0.0292969 |
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39 ---GT----- 0.000294519 |
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40 end consensus |
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41 type 5SS |
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42 center 3 |
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43 phase 2 |
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44 begin consensus |
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45 ---GT----- 0.000488281 |
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46 end consensus |
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47 type 5SS_codon |
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48 phase all |
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49 begin consensus |
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50 AAA 1.864078 |
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51 AAC 0.621359 |
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52 AAG 6.524272 |
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53 AAT 1.864078 |
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54 AAN 2.71845 |
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55 ACA 0.932039 |
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56 ACC 0.310680 |
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57 ACG 1.553398 |
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58 ACT 0.932039 |
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59 ACN 0.932039 |
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60 AGA 1.553398 |
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61 AGC 0.310680 |
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62 AGG 1.553398 |
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63 AGT 1.864078 |
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64 AGN 1.32039 |
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65 ATA 0.932039 |
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66 ATC 0.621359 |
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67 ATG 2.796117 |
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68 ATT 1.553398 |
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69 ATN 1.47573 |
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70 ANA 1.32039 |
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72 ANG 3.1068 |
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74 ANN 1.61165 |
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75 CAA 1.242718 |
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77 CAG 3.417476 |
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84 CCN 0.38835 |
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97 CNG 1.78641 |
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102 GAG 3.106796 |
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137 TGG 1.242718 |
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148 TNT 1.00971 |
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149 TNN 0.932039 |
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150 NAA 1.00971 |
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152 NAG 3.49515 |
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153 NAT 1.08738 |
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156 NCC 0.38835 |
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157 NCG 0.776699 |
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158 NCT 0.699029 |
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159 NCN 0.621359 |
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160 NGA 0.776699 |
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161 NGC 0.38835 |
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162 NGG 1.08738 |
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163 NGT 0.776699 |
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164 NGN 0.757282 |
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165 NTA 0.543689 |
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166 NTC 0.46602 |
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167 NTG 2.17476 |
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168 NTT 1.08738 |
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169 NTN 1.06796 |
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170 NNA 0.737864 |
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171 NNC 0.46602 |
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172 NNG 1.8835 |
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173 NNT 0.912621 |
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174 NNN 1 |
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175 end consensus |
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176 type 5SS_codon |
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177 phase 0 |
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178 begin consensus |
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179 AAA 0.512000 |
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180 AAC 0.512000 |
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181 AAG 6.144000 |
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182 AAT 1.536000 |
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183 AAN 2.176 |
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184 ACA 1.024000 |
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185 ACC 0.512000 |
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186 ACG 0.512000 |
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187 ACT 0.512000 |
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188 ACN 0.64 |
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189 AGA 0.512000 |
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190 AGC 0.512000 |
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191 AGG 1.536000 |
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192 AGT 1.024000 |
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193 AGN 0.896 |
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194 ATA 0.512000 |
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195 ATC 0.512000 |
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196 ATG 2.048000 |
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197 ATT 1.536000 |
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198 ATN 1.152 |
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199 ANA 0.64 |
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200 ANC 0.512 |
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201 ANG 2.56 |
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202 ANT 1.152 |
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203 ANN 1.216 |
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204 CAA 1.024000 |
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205 CAC 0.512000 |
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206 CAG 4.608000 |
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207 CAT 1.024000 |
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208 CAN 1.792 |
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209 CCA 0.512000 |
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210 CCC 0.512000 |
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211 CCG 1.024000 |
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212 CCT 0.512000 |
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213 CCN 0.64 |
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214 CGA 0.512000 |
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215 CGC 0.512000 |
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216 CGG 1.024000 |
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217 CGT 0.512000 |
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218 CGN 0.64 |
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219 CTA 0.512000 |
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220 CTC 0.512000 |
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221 CTG 1.536000 |
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222 CTT 1.024000 |
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223 CTN 0.896 |
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224 CNA 0.64 |
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225 CNC 0.512 |
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226 CNG 2.048 |
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227 CNT 0.768 |
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228 CNN 0.992 |
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229 GAA 0.512000 |
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230 GAC 0.512000 |
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231 GAG 4.096000 |
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232 GAT 1.536000 |
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233 GAN 1.664 |
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234 GCA 1.024000 |
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235 GCC 1.024000 |
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236 GCG 0.512000 |
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237 GCT 1.024000 |
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238 GCN 0.896 |
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239 GGA 0.512000 |
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240 GGC 0.512000 |
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241 GGG 0.512000 |
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242 GGT 0.512000 |
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243 GGN 0.512 |
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244 GTA 0.512000 |
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245 GTC 0.512000 |
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246 GTG 1.536000 |
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247 GTT 0.512000 |
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248 GTN 0.768 |
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249 GNA 0.64 |
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250 GNC 0.64 |
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251 GNG 1.664 |
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252 GNT 0.896 |
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253 GNN 0.96 |
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254 TAA 0.512000 |
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255 TAC 1.536000 |
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256 TAG 0.512000 |
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257 TAT 0.512000 |
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258 TAN 0.768 |
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259 TCA 0.512000 |
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260 TCC 0.512000 |
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261 TCG 0.512000 |
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262 TCT 1.536000 |
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263 TCN 0.768 |
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264 TGA 0.512000 |
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265 TGC 0.512000 |
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266 TGG 0.512000 |
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267 TGT 0.512000 |
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268 TGN 0.512 |
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269 TTA 1.024000 |
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270 TTC 0.512000 |
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271 TTG 2.048000 |
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272 TTT 1.536000 |
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273 TTN 1.28 |
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274 TNA 0.64 |
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275 TNC 0.768 |
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276 TNG 0.896 |
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277 TNT 1.024 |
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278 TNN 0.832 |
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279 NAA 0.64 |
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280 NAC 0.768 |
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281 NAG 3.84 |
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282 NAT 1.152 |
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283 NAN 1.6 |
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284 NCA 0.768 |
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285 NCC 0.64 |
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286 NCG 0.64 |
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287 NCT 0.896 |
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288 NCN 0.736 |
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289 NGA 0.512 |
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290 NGC 0.512 |
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291 NGG 0.896 |
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First commit of old repositories
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292 NGT 0.64 |
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293 NGN 0.64 |
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294 NTA 0.64 |
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295 NTC 0.512 |
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First commit of old repositories
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296 NTG 1.792 |
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First commit of old repositories
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297 NTT 1.152 |
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First commit of old repositories
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298 NTN 1.024 |
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299 NNA 0.64 |
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300 NNC 0.608 |
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First commit of old repositories
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301 NNG 1.792 |
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First commit of old repositories
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302 NNT 0.96 |
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303 NNN 1 |
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304 end consensus |
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305 type 5SS_codon |
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306 phase 1 |
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307 begin consensus |
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308 AAA 1.699115 |
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First commit of old repositories
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309 AAC 0.566372 |
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First commit of old repositories
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310 AAG 3.964602 |
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First commit of old repositories
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311 AAT 1.132743 |
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First commit of old repositories
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312 AAN 1.84071 |
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First commit of old repositories
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313 ACA 1.132743 |
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First commit of old repositories
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314 ACC 0.566372 |
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First commit of old repositories
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315 ACG 2.265487 |
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First commit of old repositories
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316 ACT 1.699115 |
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First commit of old repositories
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317 ACN 1.41593 |
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First commit of old repositories
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318 AGA 1.132743 |
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319 AGC 0.566372 |
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First commit of old repositories
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320 AGG 1.699115 |
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First commit of old repositories
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321 AGT 1.132743 |
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First commit of old repositories
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322 AGN 1.13274 |
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First commit of old repositories
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323 ATA 1.699115 |
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324 ATC 1.132743 |
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First commit of old repositories
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325 ATG 2.831858 |
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326 ATT 1.699115 |
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327 ATN 1.84071 |
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328 ANA 1.41593 |
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First commit of old repositories
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329 ANC 0.707965 |
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First commit of old repositories
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330 ANG 2.69027 |
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331 ANT 1.41593 |
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332 ANN 1.55752 |
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First commit of old repositories
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333 CAA 1.132743 |
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334 CAC 0.566372 |
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335 CAG 1.132743 |
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336 CAT 0.566372 |
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337 CAN 0.849557 |
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338 CCA 0.566372 |
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339 CCC 0.566372 |
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340 CCG 0.566372 |
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First commit of old repositories
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341 CCT 0.566372 |
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342 CCN 0.566372 |
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343 CGA 0.566372 |
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344 CGC 0.566372 |
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First commit of old repositories
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345 CGG 1.699115 |
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346 CGT 0.566372 |
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347 CGN 0.849558 |
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348 CTA 0.566372 |
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349 CTC 0.566372 |
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350 CTG 2.265487 |
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351 CTT 0.566372 |
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First commit of old repositories
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352 CTN 0.991151 |
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First commit of old repositories
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353 CNA 0.707965 |
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First commit of old repositories
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354 CNC 0.566372 |
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First commit of old repositories
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355 CNG 1.41593 |
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First commit of old repositories
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356 CNT 0.566372 |
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357 CNN 0.814159 |
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358 GAA 0.566372 |
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First commit of old repositories
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359 GAC 1.132743 |
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First commit of old repositories
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360 GAG 1.699115 |
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First commit of old repositories
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361 GAT 0.566372 |
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362 GAN 0.99115 |
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363 GCA 0.566372 |
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364 GCC 0.566372 |
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365 GCG 0.566372 |
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366 GCT 0.566372 |
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367 GCN 0.566372 |
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368 GGA 0.566372 |
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369 GGC 0.566372 |
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370 GGG 0.566372 |
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371 GGT 0.566372 |
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372 GGN 0.566372 |
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373 GTA 0.566372 |
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374 GTC 0.566372 |
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375 GTG 0.566372 |
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376 GTT 0.566372 |
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377 GTN 0.566372 |
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378 GNA 0.566372 |
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379 GNC 0.707965 |
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380 GNG 0.849558 |
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381 GNT 0.566372 |
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382 GNN 0.672567 |
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383 TAA 0.566372 |
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384 TAC 0.566372 |
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385 TAG 0.566372 |
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386 TAT 1.132743 |
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First commit of old repositories
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387 TAN 0.707965 |
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388 TCA 0.566372 |
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389 TCC 0.566372 |
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390 TCG 0.566372 |
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391 TCT 0.566372 |
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392 TCN 0.566372 |
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First commit of old repositories
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393 TGA 0.566372 |
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First commit of old repositories
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394 TGC 0.566372 |
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First commit of old repositories
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395 TGG 1.699115 |
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First commit of old repositories
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396 TGT 0.566372 |
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First commit of old repositories
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397 TGN 0.849558 |
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First commit of old repositories
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398 TTA 0.566372 |
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First commit of old repositories
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399 TTC 0.566372 |
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First commit of old repositories
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400 TTG 3.964602 |
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First commit of old repositories
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401 TTT 1.699115 |
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First commit of old repositories
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402 TTN 1.69912 |
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First commit of old repositories
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403 TNA 0.566372 |
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First commit of old repositories
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404 TNC 0.566372 |
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First commit of old repositories
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405 TNG 1.69912 |
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First commit of old repositories
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406 TNT 0.99115 |
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First commit of old repositories
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407 TNN 0.955752 |
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First commit of old repositories
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408 NAA 0.99115 |
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First commit of old repositories
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409 NAC 0.707965 |
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First commit of old repositories
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410 NAG 1.84071 |
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First commit of old repositories
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411 NAT 0.849557 |
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First commit of old repositories
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412 NAN 1.09735 |
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First commit of old repositories
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413 NCA 0.707965 |
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First commit of old repositories
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414 NCC 0.566372 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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415 NCG 0.991151 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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416 NCT 0.849558 |
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First commit of old repositories
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417 NCN 0.778761 |
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First commit of old repositories
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418 NGA 0.707965 |
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First commit of old repositories
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419 NGC 0.566372 |
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First commit of old repositories
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420 NGG 1.41593 |
5b9a38ec4a39
First commit of old repositories
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421 NGT 0.707965 |
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First commit of old repositories
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422 NGN 0.849558 |
5b9a38ec4a39
First commit of old repositories
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423 NTA 0.849558 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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424 NTC 0.707965 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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425 NTG 2.40708 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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426 NTT 1.13274 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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427 NTN 1.27434 |
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First commit of old repositories
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428 NNA 0.814159 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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429 NNC 0.637168 |
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First commit of old repositories
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430 NNG 1.66372 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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431 NNT 0.884956 |
5b9a38ec4a39
First commit of old repositories
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432 NNN 1 |
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433 end consensus |
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434 type 5SS_codon |
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435 phase 2 |
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436 begin consensus |
5b9a38ec4a39
First commit of old repositories
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parents:
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437 AAA 2.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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438 AAC 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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439 AAG 2.666667 |
5b9a38ec4a39
First commit of old repositories
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440 AAT 2.000000 |
5b9a38ec4a39
First commit of old repositories
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441 AAN 2.16667 |
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First commit of old repositories
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442 ACA 0.666667 |
5b9a38ec4a39
First commit of old repositories
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443 ACC 0.666667 |
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First commit of old repositories
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444 ACG 1.333333 |
5b9a38ec4a39
First commit of old repositories
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445 ACT 0.666667 |
5b9a38ec4a39
First commit of old repositories
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parents:
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446 ACN 0.833334 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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447 AGA 2.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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448 AGC 0.666667 |
5b9a38ec4a39
First commit of old repositories
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449 AGG 0.666667 |
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First commit of old repositories
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450 AGT 2.666667 |
5b9a38ec4a39
First commit of old repositories
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parents:
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451 AGN 1.66667 |
5b9a38ec4a39
First commit of old repositories
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parents:
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452 ATA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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453 ATC 0.666667 |
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First commit of old repositories
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454 ATG 1.333333 |
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First commit of old repositories
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455 ATT 0.666667 |
5b9a38ec4a39
First commit of old repositories
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parents:
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456 ATN 0.833334 |
5b9a38ec4a39
First commit of old repositories
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457 ANA 1.66667 |
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First commit of old repositories
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458 ANC 0.833333 |
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First commit of old repositories
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459 ANG 1.5 |
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460 ANT 1.5 |
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461 ANN 1.375 |
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First commit of old repositories
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462 CAA 1.333333 |
5b9a38ec4a39
First commit of old repositories
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463 CAC 0.666667 |
5b9a38ec4a39
First commit of old repositories
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464 CAG 1.333333 |
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First commit of old repositories
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465 CAT 0.666667 |
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First commit of old repositories
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466 CAN 1 |
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467 CCA 0.666667 |
5b9a38ec4a39
First commit of old repositories
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468 CCC 0.666667 |
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First commit of old repositories
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469 CCG 0.666667 |
5b9a38ec4a39
First commit of old repositories
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470 CCT 0.666667 |
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First commit of old repositories
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471 CCN 0.666667 |
5b9a38ec4a39
First commit of old repositories
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parents:
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472 CGA 1.333333 |
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First commit of old repositories
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parents:
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473 CGC 0.666667 |
5b9a38ec4a39
First commit of old repositories
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474 CGG 0.666667 |
5b9a38ec4a39
First commit of old repositories
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475 CGT 0.666667 |
5b9a38ec4a39
First commit of old repositories
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parents:
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476 CGN 0.833333 |
5b9a38ec4a39
First commit of old repositories
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parents:
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477 CTA 0.666667 |
5b9a38ec4a39
First commit of old repositories
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|
478 CTC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
479 CTG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
480 CTT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
481 CTN 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
482 CNA 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
483 CNC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
484 CNG 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
485 CNT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
486 CNN 0.791667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
487 GAA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
488 GAC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
489 GAG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
490 GAT 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
491 GAN 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
492 GCA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
493 GCC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
494 GCG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
495 GCT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
496 GCN 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
497 GGA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
498 GGC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
499 GGG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
500 GGT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
501 GGN 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
502 GTA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
503 GTC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
504 GTG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
505 GTT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
506 GTN 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
507 GNA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
508 GNC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
509 GNG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
510 GNT 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
511 GNN 0.708334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
512 TAA 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
513 TAC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
514 TAG 2.000000 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
515 TAT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
516 TAN 1.16667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
517 TCA 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
518 TCC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
519 TCG 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
520 TCT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
521 TCN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
522 TGA 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
523 TGC 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
524 TGG 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
525 TGT 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
526 TGN 1.33333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
527 TTA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
528 TTC 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
529 TTG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
530 TTT 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
531 TTN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
532 TNA 1.16667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
533 TNC 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
534 TNG 1.33333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
535 TNT 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
536 TNN 1.125 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
537 NAA 1.5 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
538 NAC 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
539 NAG 1.66667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
540 NAT 1.16667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
541 NAN 1.29167 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
542 NCA 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
543 NCC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
544 NCG 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
545 NCT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
546 NCN 0.791667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
547 NGA 1.5 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
548 NGC 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
549 NGG 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
550 NGT 1.33333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
551 NGN 1.125 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
552 NTA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
553 NTC 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
554 NTG 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
555 NTT 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
556 NTN 0.791667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
557 NNA 1.125 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
558 NNC 0.791667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
559 NNG 1.08333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
560 NNT 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
561 NNN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
562 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
563 type 3SS |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
564 center 3 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
565 phase all |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
566 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
567 TAG--- 1.64062 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
568 -AG--- 0.229167 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
569 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
570 type 3SS |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
571 center 3 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
572 phase 0 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
573 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
574 TAG--- 0.765625 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
575 -AG--- 0.09375 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
576 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
577 type 3SS |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
578 center 3 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
579 phase 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
580 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
581 TAG--- 0.515625 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
582 -AG--- 0.0885417 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
583 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
584 type 3SS |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
585 center 3 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
586 phase 2 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
587 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
588 -AG--- 0.125 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
589 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
590 type 3SS_codon |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
591 phase all |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
592 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
593 AAA 1.802817 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
594 AAC 1.502347 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
595 AAG 0.300469 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
596 AAT 1.802817 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
597 AAN 1.35211 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
598 ACA 0.300469 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
599 ACC 1.802817 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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600 ACG 0.300469 |
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First commit of old repositories
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601 ACT 0.901408 |
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First commit of old repositories
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602 ACN 0.826291 |
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First commit of old repositories
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parents:
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603 AGA 0.600939 |
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First commit of old repositories
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parents:
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604 AGC 0.300469 |
5b9a38ec4a39
First commit of old repositories
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parents:
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605 AGG 0.600939 |
5b9a38ec4a39
First commit of old repositories
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parents:
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606 AGT 1.502347 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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607 AGN 0.751173 |
5b9a38ec4a39
First commit of old repositories
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parents:
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608 ATA 1.502347 |
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First commit of old repositories
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parents:
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609 ATC 2.103286 |
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First commit of old repositories
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parents:
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610 ATG 1.502347 |
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First commit of old repositories
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611 ATT 2.103286 |
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First commit of old repositories
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612 ATN 1.80282 |
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First commit of old repositories
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parents:
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613 ANA 1.05164 |
5b9a38ec4a39
First commit of old repositories
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parents:
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614 ANC 1.42723 |
5b9a38ec4a39
First commit of old repositories
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parents:
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615 ANG 0.676056 |
5b9a38ec4a39
First commit of old repositories
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parents:
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616 ANT 1.57746 |
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First commit of old repositories
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parents:
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617 ANN 1.1831 |
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First commit of old repositories
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parents:
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618 CAA 2.103286 |
5b9a38ec4a39
First commit of old repositories
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parents:
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619 CAC 0.300469 |
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First commit of old repositories
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620 CAG 0.300469 |
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First commit of old repositories
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621 CAT 1.201878 |
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First commit of old repositories
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622 CAN 0.976526 |
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First commit of old repositories
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623 CCA 0.600939 |
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First commit of old repositories
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624 CCC 0.600939 |
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First commit of old repositories
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625 CCG 0.901408 |
5b9a38ec4a39
First commit of old repositories
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626 CCT 0.600939 |
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First commit of old repositories
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627 CCN 0.676056 |
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First commit of old repositories
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parents:
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628 CGA 0.300469 |
5b9a38ec4a39
First commit of old repositories
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629 CGC 0.300469 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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630 CGG 0.300469 |
5b9a38ec4a39
First commit of old repositories
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631 CGT 0.901408 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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632 CGN 0.450704 |
5b9a38ec4a39
First commit of old repositories
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parents:
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633 CTA 0.901408 |
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First commit of old repositories
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parents:
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634 CTC 0.600939 |
5b9a38ec4a39
First commit of old repositories
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parents:
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635 CTG 1.201878 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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636 CTT 1.201878 |
5b9a38ec4a39
First commit of old repositories
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parents:
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637 CTN 0.976526 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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638 CNA 0.976526 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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639 CNC 0.450704 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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640 CNG 0.676056 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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641 CNT 0.976526 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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642 CNN 0.769953 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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643 GAA 1.802817 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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644 GAC 0.300469 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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645 GAG 1.201878 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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646 GAT 2.403756 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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647 GAN 1.42723 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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648 GCA 0.901408 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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649 GCC 0.300469 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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650 GCG 1.201878 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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651 GCT 1.502347 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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652 GCN 0.976526 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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653 GGA 0.901408 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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654 GGC 0.600939 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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655 GGG 0.600939 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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656 GGT 1.201878 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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657 GGN 0.826291 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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658 GTA 1.201878 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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659 GTC 1.502347 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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660 GTG 0.600939 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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661 GTT 1.502347 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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662 GTN 1.20188 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
663 GNA 1.20188 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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664 GNC 0.676056 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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665 GNG 0.901408 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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666 GNT 1.65258 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
667 GNN 1.10798 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
668 TAA 0.600939 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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669 TAC 0.300469 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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670 TAG 0.300469 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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671 TAT 1.502347 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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672 TAN 0.676056 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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673 TCA 1.201878 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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674 TCC 0.901408 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
675 TCG 0.901408 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
676 TCT 1.201878 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
677 TCN 1.05164 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
678 TGA 0.300469 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
679 TGC 0.300469 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
680 TGG 0.901408 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
681 TGT 1.502347 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
682 TGN 0.751173 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
683 TTA 0.600939 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
684 TTC 0.600939 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
685 TTG 1.201878 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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686 TTT 2.704225 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
687 TTN 1.277 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
688 TNA 0.676056 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
689 TNC 0.525821 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
690 TNG 0.826291 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
691 TNT 1.7277 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
692 TNN 0.938967 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
693 NAA 1.57746 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
694 NAC 0.600939 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
695 NAG 0.525821 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
696 NAT 1.7277 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
697 NAN 1.10798 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
698 NCA 0.751173 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
699 NCC 0.901408 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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changeset
|
700 NCG 0.826291 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
701 NCT 1.05164 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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changeset
|
702 NCN 0.882629 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
703 NGA 0.525821 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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changeset
|
704 NGC 0.375587 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
705 NGG 0.600939 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
706 NGT 1.277 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
707 NGN 0.694835 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
708 NTA 1.05164 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
709 NTC 1.20188 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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changeset
|
710 NTG 1.12676 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
711 NTT 1.87793 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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712 NTN 1.31455 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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changeset
|
713 NNA 0.976526 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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changeset
|
714 NNC 0.769953 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
715 NNG 0.769953 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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changeset
|
716 NNT 1.48357 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
717 NNN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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changeset
|
718 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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changeset
|
719 type 3SS_codon |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
720 phase 0 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
721 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
722 AAA 1.465649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
723 AAC 1.465649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
724 AAG 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
725 AAT 1.954198 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
726 AAN 1.34351 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
727 ACA 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
728 ACC 1.954198 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
729 ACG 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
730 ACT 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
731 ACN 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
732 AGA 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
733 AGC 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
734 AGG 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
735 AGT 1.954198 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
736 AGN 0.854962 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
737 ATA 1.465649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
738 ATC 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
739 ATG 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
740 ATT 1.465649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
741 ATN 1.09924 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
742 ANA 0.9771 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
743 ANC 1.09924 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
744 ANG 0.610687 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
745 ANT 1.58779 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
746 ANN 1.0687 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
747 CAA 2.931298 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
748 CAC 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
749 CAG 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
750 CAT 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
751 CAN 1.22137 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
752 CCA 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
753 CCC 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
754 CCG 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
755 CCT 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
756 CCN 0.732824 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
757 CGA 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
758 CGC 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
759 CGG 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
760 CGT 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
761 CGN 0.48855 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
762 CTA 1.465649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
763 CTC 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
764 CTG 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
765 CTT 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
766 CTN 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
767 CNA 1.46565 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
768 CNC 0.610687 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
769 CNG 0.48855 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
770 CNT 0.854962 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
771 CNN 0.854962 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
772 GAA 1.954198 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
773 GAC 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
774 GAG 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
775 GAT 2.931298 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
776 GAN 1.58779 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
777 GCA 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
778 GCC 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
779 GCG 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
780 GCT 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
781 GCN 0.732824 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
782 GGA 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
783 GGC 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
784 GGG 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
785 GGT 1.465649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
786 GGN 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
787 GTA 1.465649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
788 GTC 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
789 GTG 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
790 GTT 1.465649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
791 GTN 1.09924 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
792 GNA 1.22137 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
793 GNC 0.732824 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
794 GNG 0.854962 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
795 GNT 1.58779 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
796 GNN 1.09924 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
797 TAA 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
798 TAC 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
799 TAG 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
800 TAT 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
801 TAN 0.610687 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
802 TCA 1.465649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
803 TCC 1.465649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
804 TCG 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
805 TCT 1.954198 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
806 TCN 1.46565 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
807 TGA 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
808 TGC 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
809 TGG 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
810 TGT 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
811 TGN 0.610687 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
812 TTA 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
813 TTC 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
814 TTG 0.488550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
815 TTT 2.931298 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
816 TTN 1.22137 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
817 TNA 0.854962 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
818 TNC 0.732825 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
819 TNG 0.732824 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
820 TNT 1.58779 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
821 TNN 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
822 NAA 1.70992 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
823 NAC 0.732825 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
824 NAG 0.610687 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
825 NAT 1.70992 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
826 NAN 1.19084 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
827 NCA 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
828 NCC 1.09924 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
829 NCG 0.732824 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
830 NCT 1.09924 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
831 NCN 0.977099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
832 NGA 0.48855 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
833 NGC 0.610687 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
834 NGG 0.732824 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
835 NGT 1.09924 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
836 NGN 0.732825 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
837 NTA 1.34351 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
838 NTC 0.732824 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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839 NTG 0.610687 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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840 NTT 1.70992 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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841 NTN 1.09924 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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842 NNA 1.12977 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
843 NNC 0.793893 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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844 NNG 0.671756 |
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First commit of old repositories
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parents:
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845 NNT 1.40458 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
846 NNN 1 |
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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847 end consensus |
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First commit of old repositories
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parents:
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848 type 3SS_codon |
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|
849 phase 1 |
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First commit of old repositories
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850 begin consensus |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
851 AAA 1.684211 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
852 AAC 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
853 AAG 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
854 AAT 1.684211 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
855 AAN 1.26316 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
856 ACA 0.561404 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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857 ACC 1.684211 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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858 ACG 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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859 ACT 0.561404 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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860 ACN 0.842106 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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861 AGA 1.122807 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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862 AGC 0.561404 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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863 AGG 1.122807 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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864 AGT 0.561404 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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865 AGN 0.842106 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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866 ATA 1.122807 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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867 ATC 2.245614 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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868 ATG 2.245614 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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869 ATT 1.684211 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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870 ATN 1.82456 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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871 ANA 1.12281 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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872 ANC 1.40351 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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873 ANG 1.12281 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
874 ANT 1.12281 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
875 ANN 1.19298 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
876 CAA 0.561404 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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877 CAC 0.561404 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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878 CAG 0.561404 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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|
879 CAT 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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880 CAN 0.701755 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
881 CCA 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
882 CCC 0.561404 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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883 CCG 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
884 CCT 0.561404 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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885 CCN 0.701755 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
886 CGA 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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887 CGC 0.561404 |
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First commit of old repositories
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parents:
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888 CGG 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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889 CGT 1.684211 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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890 CGN 0.842106 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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891 CTA 0.561404 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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892 CTC 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
893 CTG 2.245614 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
894 CTT 1.684211 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
895 CTN 1.26316 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
896 CNA 0.561404 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
897 CNC 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
898 CNG 1.12281 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
899 CNT 1.26316 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
900 CNN 0.877193 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
901 GAA 1.684211 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
902 GAC 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
903 GAG 1.684211 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
904 GAT 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
905 GAN 1.26316 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
906 GCA 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
907 GCC 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
908 GCG 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
909 GCT 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
910 GCN 0.842105 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
911 GGA 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
912 GGC 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
913 GGG 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
914 GGT 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
915 GGN 0.842105 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
916 GTA 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
917 GTC 1.684211 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
918 GTG 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
919 GTT 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
920 GTN 1.26316 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
921 GNA 1.26316 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
922 GNC 0.842106 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
923 GNG 0.982457 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
924 GNT 1.12281 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
925 GNN 1.05263 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
926 TAA 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
927 TAC 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
928 TAG 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
929 TAT 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
930 TAN 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
931 TCA 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
932 TCC 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
933 TCG 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
934 TCT 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
935 TCN 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
936 TGA 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
937 TGC 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
938 TGG 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
939 TGT 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
940 TGN 0.842105 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
941 TTA 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
942 TTC 1.122807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
943 TTG 2.245614 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
944 TTT 2.245614 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
945 TTN 1.54386 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
946 TNA 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
947 TNC 0.701755 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
948 TNG 1.12281 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
949 TNT 1.12281 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
950 TNN 0.877193 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
951 NAA 1.12281 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
952 NAC 0.701755 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
953 NAG 0.842106 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
954 NAT 1.12281 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
955 NAN 0.947369 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
956 NCA 0.701755 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
957 NCC 0.842106 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
958 NCG 0.701755 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
959 NCT 0.701755 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
960 NCN 0.736842 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
961 NGA 0.842106 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
962 NGC 0.561404 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
963 NGG 0.842105 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
964 NGT 1.12281 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
965 NGN 0.842106 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
966 NTA 0.842106 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
967 NTC 1.40351 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
968 NTG 1.96491 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
969 NTT 1.68421 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
970 NTN 1.47368 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
971 NNA 0.877193 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
972 NNC 0.877193 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
973 NNG 1.08772 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
974 NNT 1.15789 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
975 NNN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
976 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
977 type 3SS_codon |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
978 phase 2 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
979 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
980 AAA 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
981 AAC 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
982 AAG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
983 AAT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
984 AAN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
985 ACA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
986 ACC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
987 ACG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
988 ACT 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
989 ACN 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
990 AGA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
991 AGC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
992 AGG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
993 AGT 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
994 AGN 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
995 ATA 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
996 ATC 2.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
997 ATG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
998 ATT 2.000000 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
999 ATN 1.66667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1000 ANA 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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changeset
|
1001 ANC 1.33333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1002 ANG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1003 ANT 1.33333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1004 ANN 1.08333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1005 CAA 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1006 CAC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1007 CAG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1008 CAT 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1009 CAN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1010 CCA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1011 CCC 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1012 CCG 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1013 CCT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1014 CCN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1015 CGA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1016 CGC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1017 CGG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1018 CGT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1019 CGN 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1020 CTA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1021 CTC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1022 CTG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1023 CTT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1024 CTN 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1025 CNA 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1026 CNC 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1027 CNG 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1028 CNT 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1029 CNN 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1030 GAA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1031 GAC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1032 GAG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1033 GAT 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1034 GAN 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1035 GCA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1036 GCC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1037 GCG 2.000000 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1038 GCT 2.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1039 GCN 1.5 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1040 GGA 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1041 GGC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1042 GGG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1043 GGT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1044 GGN 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1045 GTA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1046 GTC 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1047 GTG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1048 GTT 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1049 GTN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1050 GNA 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1051 GNC 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1052 GNG 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1053 GNT 1.5 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1054 GNN 1.04167 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1055 TAA 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1056 TAC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1057 TAG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1058 TAT 2.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1059 TAN 1.33333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1060 TCA 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1061 TCC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1062 TCG 1.333333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1063 TCT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1064 TCN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1065 TGA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1066 TGC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1067 TGG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1068 TGT 2.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1069 TGN 1.16667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1070 TTA 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1071 TTC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1072 TTG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1073 TTT 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1074 TTN 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1075 TNA 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1076 TNC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1077 TNG 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1078 TNT 1.66667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1079 TNN 1.04167 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1080 NAA 1.16667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1081 NAC 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1082 NAG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1083 NAT 1.5 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1084 NAN 1.04167 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1085 NCA 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1086 NCC 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1087 NCG 1.33333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1088 NCT 1.33333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1089 NCN 1.08333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
1090 NGA 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1091 NGC 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1092 NGG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1093 NGT 1.33333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1094 NGN 0.875 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1095 NTA 0.833333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1096 NTC 1.33333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1097 NTG 0.666667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1098 NTT 1.16667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1099 NTN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1100 NNA 0.916667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1101 NNC 0.916667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1102 NNG 0.833334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1103 NNT 1.33333 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1104 NNN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1105 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1106 type CDS |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1107 phase all |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1108 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1109 AAA 2.386335 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1110 AAC 1.053160 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1111 AAG 1.564912 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1112 AAT 1.686987 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1113 AAN 1.67285 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1114 ACA 0.987639 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1115 ACC 0.645552 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1116 ACG 0.588997 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1117 ACT 1.051091 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1118 ACN 0.81832 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1119 AGA 1.264206 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1120 AGC 0.831769 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1121 AGG 0.727625 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1122 AGT 0.865564 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1123 AGN 0.922291 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1124 ATA 0.993847 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1125 ATC 1.040746 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1126 ATG 1.394558 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1127 ATT 1.851134 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1128 ATN 1.32007 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1129 ANA 1.40801 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1130 ANC 0.892807 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1131 ANG 1.06902 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1132 ANT 1.36369 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1133 ANN 1.18338 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1134 CAA 1.498701 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1135 CAC 0.575203 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1136 CAG 0.708314 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1137 CAT 0.951086 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1138 CAN 0.933326 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1139 CCA 0.795215 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1140 CCC 0.491751 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1141 CCG 0.455887 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1142 CCT 0.832459 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1143 CCN 0.643828 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1144 CGA 0.706935 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1145 CGC 0.368985 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1146 CGG 0.354502 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1147 CGT 0.741419 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1148 CGN 0.54296 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1149 CTA 0.836597 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1150 CTC 0.861426 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1151 CTG 0.917980 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1152 CTT 1.436629 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1153 CTN 1.01316 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1154 CNA 0.959362 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1155 CNC 0.574341 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1156 CNG 0.609171 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1157 CNT 0.990398 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1158 CNN 0.783318 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1159 GAA 1.682160 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1160 GAC 0.641414 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1161 GAG 0.823493 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1162 GAT 1.255930 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1163 GAN 1.10075 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1164 GCA 0.793146 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1165 GCC 0.515890 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1166 GCG 0.364847 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1167 GCT 0.964880 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1168 GCN 0.659691 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1169 GGA 0.946258 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1170 GGC 0.470370 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1171 GGG 0.352433 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1172 GGT 0.846942 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1173 GGN 0.654001 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1174 GTA 0.737281 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1175 GTC 0.688313 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1176 GTG 0.724867 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1177 GTT 1.275931 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1178 GTN 0.856598 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1179 GNA 1.03971 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1180 GNC 0.578997 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1181 GNG 0.56641 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1182 GNT 1.08592 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1183 GNN 0.81776 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1184 TAA 1.130406 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1185 TAC 0.999364 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1186 TAG 0.591066 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1187 TAT 1.385592 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1188 TAN 1.02661 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1189 TCA 1.159373 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1190 TCC 0.921429 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1191 TCG 0.764179 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1192 TCT 1.205582 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1193 TCN 1.01264 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1194 TGA 1.487666 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1195 TGC 0.967638 |
5b9a38ec4a39
First commit of old repositories
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parents:
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1196 TGG 1.180064 |
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First commit of old repositories
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parents:
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1197 TGT 0.966949 |
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First commit of old repositories
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parents:
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1198 TGN 1.15058 |
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First commit of old repositories
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parents:
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1199 TTA 1.538704 |
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First commit of old repositories
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parents:
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1200 TTC 1.455251 |
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First commit of old repositories
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parents:
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1201 TTG 1.566981 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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1202 TTT 2.128391 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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1203 TTN 1.67233 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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1204 TNA 1.32904 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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1205 TNC 1.08592 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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1206 TNG 1.02557 |
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First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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1207 TNT 1.42163 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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1208 TNN 1.21554 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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1209 NAA 1.6744 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1210 NAC 0.817285 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1211 NAG 0.921946 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1212 NAT 1.3199 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1213 NAN 1.18338 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1214 NCA 0.933843 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1215 NCC 0.643655 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1216 NCG 0.543477 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1217 NCT 1.0135 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1218 NCN 0.78362 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1219 NGA 1.10127 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1220 NGC 0.65969 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1221 NGG 0.653656 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
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|
1222 NGT 0.855218 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1223 NGN 0.817458 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1224 NTA 1.02661 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1225 NTC 1.01143 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1226 NTG 1.1511 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1227 NTT 1.67302 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1228 NTN 1.21554 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1229 NNA 1.18403 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1230 NNC 0.783016 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1231 NNG 0.817544 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1232 NNT 1.21541 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1233 NNN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1234 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1235 type CDS |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1236 phase 0 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
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|
1237 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1238 AAA 2.488005 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1239 AAC 1.039424 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1240 AAG 1.727552 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1241 AAT 2.175971 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1242 AAN 1.85774 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1243 ACA 0.874108 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1244 ACC 0.690194 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1245 ACG 0.386426 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1246 ACT 1.630428 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1247 ACN 0.895289 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1248 AGA 0.702593 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1249 AGC 0.514546 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1250 AGG 0.276904 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1251 AGT 0.880307 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1252 AGN 0.593587 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1253 ATA 0.741855 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1254 ATC 0.721191 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1255 ATG 1.264667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1256 ATT 2.516935 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1257 ATN 1.31116 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1258 ANA 1.20164 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1259 ANC 0.741339 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1260 ANG 0.913887 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1261 ANT 1.80091 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1262 ANN 1.16444 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1263 CAA 1.702754 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1264 CAC 0.394692 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1265 CAG 0.702593 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1266 CAT 1.045623 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1267 CAN 0.961415 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1268 CCA 0.774918 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1269 CCC 0.566207 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1270 CCG 0.258306 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1271 CCT 1.444448 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1272 CCN 0.76097 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1273 CGA 0.481483 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1274 CGC 0.421556 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1275 CGG 0.171515 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1276 CGT 1.318395 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1277 CGN 0.598237 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1278 CTA 0.506280 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1279 CTC 0.477350 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1280 CTG 0.343031 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1281 CTT 1.657292 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1282 CTN 0.745988 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1283 CNA 0.866359 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1284 CNC 0.464951 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1285 CNG 0.368861 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1286 CNT 1.36644 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1287 CNN 0.766653 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1288 GAA 2.884763 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1289 GAC 1.039424 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1290 GAG 1.504375 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1291 GAT 2.576862 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1292 GAN 2.00136 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1293 GCA 1.004294 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1294 GCC 0.745988 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1295 GCG 0.291369 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1296 GCT 1.905266 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1297 GCN 0.986729 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1298 GGA 1.049756 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1299 GGC 0.599270 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1300 GGG 0.264506 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1301 GGT 1.582900 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1302 GGN 0.874108 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1303 GTA 0.762520 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1304 GTC 0.750121 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1305 GTG 0.495948 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1306 GTT 2.006522 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1307 GTN 1.00378 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1308 GNA 1.42533 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1309 GNC 0.783701 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1310 GNG 0.639049 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1311 GNT 2.01789 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1312 GNN 1.21649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1313 TAA 0.000000 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1314 TAC 0.770786 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1315 TAG 0.000000 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1316 TAT 1.477511 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1317 TAN 0.562074 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1318 TCA 1.024959 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1319 TCC 0.772852 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1320 TCG 0.415356 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1321 TCT 1.826741 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1322 TCN 1.00998 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1323 TGA 0.000000 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1324 TGC 0.322366 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1325 TGG 0.588938 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1326 TGT 0.485616 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1327 TGN 0.34923 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1328 TTA 1.630428 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1329 TTC 0.907171 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1330 TTG 1.450647 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1331 TTT 1.965193 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1332 TTN 1.48836 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1333 TNA 0.663847 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1334 TNC 0.693294 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1335 TNG 0.613735 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1336 TNT 1.43877 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1337 TNN 0.85241 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1338 NAA 1.76888 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1339 NAC 0.811082 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1340 NAG 0.98363 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1341 NAT 1.81899 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1342 NAN 1.34565 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1343 NCA 0.91957 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1344 NCC 0.69381 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1345 NCG 0.337864 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1346 NCT 1.70172 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1347 NCN 0.913241 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1348 NGA 0.558458 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1349 NGC 0.464434 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1350 NGG 0.325466 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1351 NGT 1.0668 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1352 NGN 0.603791 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1353 NTA 0.910271 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1354 NTC 0.713958 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1355 NTG 0.888573 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1356 NTT 2.03649 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1357 NTN 1.13732 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1358 NNA 1.03929 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1359 NNC 0.670821 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1360 NNG 0.633883 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1361 NNT 1.656 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1362 NNN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1363 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1364 type CDS |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1365 phase 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1366 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1367 AAA 2.349249 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1368 AAC 1.177724 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1369 AAG 2.219080 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1370 AAT 1.330621 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1371 AAN 1.76917 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1372 ACA 1.167393 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1373 ACC 0.504148 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1374 ACG 0.816142 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1375 ACT 0.756223 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1376 ACN 0.810976 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1377 AGA 1.086812 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1378 AGC 0.979370 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1379 AGG 1.134334 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1380 AGT 0.735561 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1381 AGN 0.984019 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1382 ATA 1.694270 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1383 ATC 1.365747 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1384 ATG 2.539338 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1385 ATT 1.675674 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1386 ATN 1.81876 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1387 ANA 1.57443 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1388 ANC 1.00675 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1389 ANG 1.67722 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1390 ANT 1.12452 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1391 ANN 1.34573 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1392 CAA 1.200452 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1393 CAC 0.667377 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1394 CAG 1.028959 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1395 CAT 0.781017 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1396 CAN 0.919451 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1397 CCA 0.997966 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1398 CCC 0.456626 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1399 CCG 0.727296 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1400 CCT 0.595061 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1401 CCN 0.694237 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1402 CGA 0.435964 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1403 CGC 0.227280 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1404 CGG 0.378111 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1405 CGT 0.309927 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1406 CGN 0.337821 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1407 CTA 1.661211 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1408 CTC 1.413269 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1409 CTG 2.157094 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1410 CTT 1.576497 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1411 CTN 1.70202 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1412 CNA 1.0739 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1413 CNC 0.691138 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1414 CNG 1.07286 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1415 CNT 0.815626 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1416 CNN 0.913382 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1417 GAA 0.865730 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1418 GAC 0.384310 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1419 GAG 0.545472 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1420 GAT 0.440097 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1421 GAN 0.558902 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1422 GCA 0.615722 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1423 GCC 0.355383 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1424 GCG 0.475222 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1425 GCT 0.411170 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1426 GCN 0.464374 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1427 GGA 0.407038 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1428 GGC 0.245876 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1429 GGG 0.334722 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1430 GGT 0.314060 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1431 GGN 0.325424 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1432 GTA 1.076481 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1433 GTC 0.791348 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1434 GTG 1.504181 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1435 GTT 0.894657 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1436 GTN 1.06667 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1437 GNA 0.741243 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1438 GNC 0.444229 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1439 GNG 0.714899 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1440 GNT 0.514996 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1441 GNN 0.603842 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1442 TAA 1.140533 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1443 TAC 0.768620 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1444 TAG 0.964907 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1445 TAT 0.766554 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1446 TAN 0.910154 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1447 TCA 0.896723 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1448 TCC 0.595061 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1449 TCG 0.760355 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1450 TCT 0.603325 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1451 TCN 0.713866 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1452 TGA 1.037224 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1453 TGC 0.665311 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1454 TGG 1.208717 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1455 TGT 0.640517 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1456 TGN 0.887942 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1457 TTA 1.993866 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1458 TTC 1.686005 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1459 TTG 2.652978 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1460 TTT 1.812042 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1461 TTN 2.03622 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1462 TNA 1.26709 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1463 TNC 0.928749 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1464 TNG 1.39674 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1465 TNT 0.95561 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1466 TNN 1.13705 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1467 NAA 1.38899 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1468 NAC 0.749508 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1469 NAG 1.1896 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1470 NAT 0.829572 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1471 NAN 1.03942 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1472 NCA 0.919451 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1473 NCC 0.477804 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1474 NCG 0.694754 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1475 NCT 0.591445 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1476 NCN 0.670863 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1477 NGA 0.741759 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1478 NGC 0.529459 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1479 NGG 0.763971 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1480 NGT 0.500016 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1481 NGN 0.633801 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1482 NTA 1.60646 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1483 NTC 1.31409 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1484 NTG 2.2134 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1485 NTT 1.48972 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1486 NTN 1.65592 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1487 NNA 1.16416 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1488 NNC 0.767716 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1489 NNG 1.21543 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1490 NNT 0.852688 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1491 NNN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1492 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1493 type CDS |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1494 phase 2 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1495 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1496 AAA 2.316265 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1497 AAC 0.942210 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1498 AAG 0.745916 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1499 AAT 1.551753 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1500 AAN 1.38904 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1501 ACA 0.921547 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1502 ACC 0.743850 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1503 ACG 0.566152 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1504 ACT 0.766578 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1505 ACN 0.749532 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1506 AGA 2.002195 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1507 AGC 1.002131 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1508 AGG 0.772777 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1509 AGT 0.981468 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1510 AGN 1.18964 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1511 ATA 0.545490 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1512 ATC 1.035191 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1513 ATG 0.378124 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1514 ATT 1.357526 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1515 ATN 0.829083 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1516 ANA 1.44637 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1517 ANC 0.930845 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1518 ANG 0.615742 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1519 ANT 1.16433 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1520 ANN 1.03932 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1521 CAA 1.591012 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1522 CAC 0.665332 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1523 CAG 0.394654 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1524 CAT 1.026926 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1525 CAN 0.919481 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1526 CCA 0.613676 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1527 CCC 0.454575 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1528 CCG 0.384322 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1529 CCT 0.458707 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1530 CCN 0.47782 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1531 CGA 1.204623 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1532 CGC 0.460774 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1533 CGG 0.516562 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1534 CGT 0.597146 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1535 CGN 0.694776 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1536 CTA 0.342997 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1537 CTC 0.694260 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1538 CTG 0.254149 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1539 CTT 1.074450 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1540 CTN 0.591464 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1541 CNA 0.938077 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1542 CNC 0.568735 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1543 CNG 0.387422 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1544 CNT 0.789307 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1545 CNN 0.670885 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1546 GAA 1.293472 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1547 GAC 0.502099 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1548 GAG 0.421515 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1549 GAT 0.750048 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1550 GAN 0.741783 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1551 GCA 0.760380 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1552 GCC 0.448376 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1553 GCG 0.330600 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1554 GCT 0.578550 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1555 GCN 0.529477 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1556 GGA 1.382321 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1557 GGC 0.568219 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1558 GGG 0.460774 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1559 GGT 0.644670 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1560 GGN 0.763996 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1561 GTA 0.373991 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1562 GTC 0.524827 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1563 GTG 0.175631 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1564 GTT 0.925680 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1565 GTN 0.500032 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1566 GNA 0.952541 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1567 GNC 0.51088 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1568 GNG 0.34713 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1569 GNT 0.724737 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1570 GNN 0.633822 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1571 TAA 2.248079 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1572 TAC 1.458772 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1573 TAG 0.807903 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1574 TAT 1.911280 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1575 TAN 1.60651 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1576 TCA 1.555886 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1577 TCC 1.396784 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1578 TCG 1.117841 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1579 TCT 1.186027 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1580 TCN 1.31413 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1581 TGA 3.421709 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1582 TGC 1.915413 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1583 TGG 1.741848 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1584 TGT 1.774908 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1585 TGN 2.21347 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1586 TTA 0.989733 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1587 TTC 1.770775 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1588 TTG 0.595080 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1589 TTT 2.603474 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1590 TTN 1.48977 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1591 TNA 2.05385 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1592 TNC 1.63544 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1593 TNG 1.06567 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1594 TNT 1.86892 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1595 TNN 1.65597 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1596 NAA 1.86221 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1597 NAC 0.892103 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1598 NAG 0.592497 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1599 NAT 1.31 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1600 NAN 1.1642 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1601 NCA 0.962872 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1602 NCC 0.760896 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1603 NCG 0.599729 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1604 NCT 0.747465 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1605 NCN 0.767741 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1606 NGA 2.00271 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1607 NGC 0.986634 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1608 NGG 0.87299 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1609 NGT 0.999548 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1610 NGN 1.21547 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1611 NTA 0.563053 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1612 NTC 1.00626 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1613 NTG 0.350746 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1614 NTT 1.49028 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1615 NTN 0.852586 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1616 NNA 1.34771 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1617 NNC 0.911474 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1618 NNG 0.603991 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1619 NNT 1.13682 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1620 NNN 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1621 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1622 type Intron_Corr_Term |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1623 phase all |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1624 225.12 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1625 type Intron_Corr_Term |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1626 phase 0 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1627 524.049 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1628 type Intron_Corr_Term |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1629 phase 1 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1630 652.388 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1631 type Intron_Corr_Term |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1632 phase 2 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1633 998.969 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1634 type Intron_emission |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1635 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1636 A 1.233115 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1637 C 0.595593 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1638 G 0.670399 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1639 T 1.500893 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1640 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1641 type Pyrimidine_emission |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1642 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1643 A 0.261549 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1644 C 0.869936 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1645 G 0.127932 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1646 T 2.740583 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1647 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1648 type Spacer_emission |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1649 begin consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1650 A 1.495231 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1651 C 0.607484 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1652 G 0.513573 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1653 T 1.383712 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1654 end consensus |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1655 type Intron_Stay_Prob |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1656 0.988929 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1657 type Central_Intron_Stay_Prob |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1658 0.983466 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1659 type Pyrimidine_Stay_Prob |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1660 0.904578 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1661 type No_Spacer_Prob |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1662 0.0743243 |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1663 type Spacer_Stay_Prob |
5b9a38ec4a39
First commit of old repositories
osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
parents:
diff
changeset
|
1664 0.952081 |